RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 PCDH18Q9HCL0 1135 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 MPP6Q9NZW5 540 aa11.63□□□□□ -0.55
TMEM116-218ENST00000552839 RCOR3Q9P2K3 495 aaPredicted RBP11.63□□□□□ -0.55
TMEM116-218ENST00000552839 PACSIN2Q9UNF0 486 aaPredicted RBP11.63□□□□□ -0.55
TMEM116-218ENST00000552839 PLXNA2O75051 1894 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 TK2O00142 265 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 PLK4O00444 970 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 SYNCRIPO60506 623 aaKnown RBP11.62□□□□□ -0.55
TMEM116-218ENST00000552839 PENKP01210 267 aaPredicted RBP11.62□□□□□ -0.55
TMEM116-218ENST00000552839 ACADMP11310 421 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 RHOQP17081 205 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 PRKCHP24723 683 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 OR1E1P30953 314 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 DEKP35659 375 aaKnown RBP11.62□□□□□ -0.55
TMEM116-218ENST00000552839 ETFBP38117 255 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 MAPKAPK2P49137 400 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 AFF3P51826 1226 aaKnown RBP11.62□□□□□ -0.55
TMEM116-218ENST00000552839 NRG1Q02297 640 aaPredicted RBP11.62□□□□□ -0.55
TMEM116-218ENST00000552839 MPP7Q5T2T1 576 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 TXNRD3NBQ6F5E7 133 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 DHRS13Q6UX07 377 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 LAYNQ6UX15 382 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 C14orf80Q86SX3 495 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 NT5DC3Q86UY8 548 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 KATNAL2Q8IYT4 538 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 RCOR2Q8IZ40 523 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 C17orf53Q8N3J3 647 aaPredicted RBP11.62□□□□□ -0.55
TMEM116-218ENST00000552839 UCMAQ8WVF2 138 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 SNX19Q92543 992 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 IGSF8Q969P0 613 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 PRMT1Q99873 361 aaKnown RBP11.62□□□□□ -0.55
TMEM116-218ENST00000552839 C6orf106Q9H6K1 298 aaPredicted RBP11.62□□□□□ -0.55
TMEM116-218ENST00000552839 ANLNQ9NQW6 1124 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 ELOVL2Q9NXB9 296 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 PPARGC1AQ9UBK2 798 aaKnown RBP11.62□□□□□ -0.55
TMEM116-218ENST00000552839 VPS28Q9UK41 221 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 ANKRD6Q9Y2G4 727 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 JRKLQ9Y4A0 524 aa11.62□□□□□ -0.55
TMEM116-218ENST00000552839 COL5A1P20908 1838 aaPredicted RBP11.61□□□□□ -0.55
TMEM116-218ENST00000552839 FAM72CH0Y354 149 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 APOL1O14791 398 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 ATXN7O15265 892 aaPredicted RBP11.61□□□□□ -0.55
TMEM116-218ENST00000552839 RAMP2O60895 175 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 NEBLO76041 1014 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 HLA-EP13747 358 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 ZFXP17010 805 aaPredicted RBP11.61□□□□□ -0.55
TMEM116-218ENST00000552839 KDELR1P24390 212 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 HOXD9P28356 352 aaPredicted RBP11.61□□□□□ -0.55
TMEM116-218ENST00000552839 ACSL1P33121 698 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 GRK6P43250 576 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 MARCKSL1P49006 195 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 SGSHP51688 502 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 DYNLT1P63172 113 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 TFDP2Q14188 446 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 DPYSL3Q14195 570 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 E2F5Q15329 346 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 ATP13A4Q4VNC1 1196 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 TFDP3Q5H9I0 405 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 FAM72AQ5TYM5 149 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 TMEM215Q68D42 235 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 FAM72DQ6L9T8 149 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 FAM72BQ86X60 149 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 AHI1Q8N157 1196 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 RTL3Q8N8U3 475 aaKnown RBP11.61□□□□□ -0.55
TMEM116-218ENST00000552839 EXD1Q8NHP7 514 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 WFIKKN2Q8TEU8 576 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 SORCS1Q8WY21 1168 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 KRT35Q92764 455 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 CSPG4P5Q96PW8 444 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 PSMB7Q99436 277 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 SPON2Q9BUD6 331 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 SLC2A11Q9BYW1 496 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 CIPCQ9C0C6 399 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 PCED1AQ9H1Q7 454 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 PRORYQ9H606 182 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 TM9SF3Q9HD45 589 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 ABCB8Q9NUT2 735 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 DNAI1Q9UI46 699 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 GGA2Q9UJY4 613 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 CLEC4EQ9ULY5 219 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 HPCAL4Q9UM19 191 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 PCDHA3Q9Y5H8 950 aa11.61□□□□□ -0.55
TMEM116-218ENST00000552839 CTAGE9A4FU28 777 aa11.6□□□□□ -0.55
TMEM116-218ENST00000552839 ARHGAP42A6NI28 874 aa11.6□□□□□ -0.55
TMEM116-218ENST00000552839 H0Y8X5 98 aa11.6□□□□□ -0.55
TMEM116-218ENST00000552839 DFFAO00273 331 aa11.6□□□□□ -0.55
TMEM116-218ENST00000552839 ENC1O14682 589 aa11.6□□□□□ -0.55
TMEM116-218ENST00000552839 TLX3O43711 291 aaPredicted RBP11.6□□□□□ -0.55
TMEM116-218ENST00000552839 PCDHGA12O60330 932 aa11.6□□□□□ -0.55
TMEM116-218ENST00000552839 CNTN5O94779 1100 aa11.6□□□□□ -0.55
TMEM116-218ENST00000552839 EPHX1P07099 455 aa11.6□□□□□ -0.55
TMEM116-218ENST00000552839 PABPC1P11940 636 aaKnown RBP11.6□□□□□ -0.55
TMEM116-218ENST00000552839 ERCC2P18074 760 aa11.6□□□□□ -0.55
TMEM116-218ENST00000552839 POLR2EP19388 210 aaKnown RBP11.6□□□□□ -0.55
TMEM116-218ENST00000552839 CASQ1P31415 396 aa11.6□□□□□ -0.55
TMEM116-218ENST00000552839 GRIA4P48058 902 aa11.6□□□□□ -0.55
TMEM116-218ENST00000552839 CLDN6P56747 220 aa11.6□□□□□ -0.55
TMEM116-218ENST00000552839 COPS2P61201 443 aa11.6□□□□□ -0.55
TMEM116-218ENST00000552839 ST8SIA6P61647 398 aa11.6□□□□□ -0.55
TMEM116-218ENST00000552839 IL9RQ01113 521 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms