RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 PABPC3Q9H361 631 aaKnown RBP9.27□□□□□ -0.93
CCDC59-207ENST00000552606 TRMT1Q9NXH9 659 aaKnown RBP9.27□□□□□ -0.93
CCDC59-207ENST00000552606 BCCIPQ9P287 314 aaKnown RBP eCLIP9.27□□□□□ -0.93
CCDC59-207ENST00000552606 SAE1Q9UBE0 346 aaPredicted RBP9.27□□□□□ -0.93
CCDC59-207ENST00000552606 SERGEFQ9UGK8 458 aa9.27□□□□□ -0.93
CCDC59-207ENST00000552606 MBD1Q9UIS9 605 aaPredicted RBP9.27□□□□□ -0.93
CCDC59-207ENST00000552606 PPM1HQ9ULR3 514 aa9.27□□□□□ -0.93
CCDC59-207ENST00000552606 ARIH1Q9Y4X5 557 aaPredicted RBP9.27□□□□□ -0.93
CCDC59-207ENST00000552606 R4GN57 208 aa9.27□□□□□ -0.93
CCDC59-207ENST00000552606 TCRBV7S2A1N4TA0A589 114 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 KIF2AO00139 706 aaPredicted RBP9.26□□□□□ -0.93
CCDC59-207ENST00000552606 FANCGO15287 622 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 MID1O15344 667 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 HRO43593 1189 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 LEFTY1O75610 366 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 GJB3O75712 270 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 IGSF6O95976 241 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 ADH1BP00325 375 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 BCKDHBP21953 392 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 CCNCP24863 283 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 CHRNA3P32297 505 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 NBL1P41271 181 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 CSNK1DP48730 415 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 NR2C2P49116 596 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 DNA2P51530 1060 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 TPMTP51580 245 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 SNRPD1P62314 119 aaKnown RBP9.26□□□□□ -0.93
CCDC59-207ENST00000552606 IFI35P80217 286 aaPredicted RBP9.26□□□□□ -0.93
CCDC59-207ENST00000552606 ZBTB17Q13105 803 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 LBRQ14739 615 aaKnown RBP9.26□□□□□ -0.93
CCDC59-207ENST00000552606 PDK1Q15118 436 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 AGBL4Q5VU57 503 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 TIGD7Q6NT04 549 aaPredicted RBP9.26□□□□□ -0.93
CCDC59-207ENST00000552606 USP30Q70CQ3 517 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 MMAAQ8IVH4 418 aaKnown RBP9.26□□□□□ -0.93
CCDC59-207ENST00000552606 CCDC13Q8IYE1 715 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 SLC35F6Q8N357 371 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 FAM160A2Q8N612 972 aaPredicted RBP9.26□□□□□ -0.93
CCDC59-207ENST00000552606 FRMD1Q8N878 549 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 TSEN2Q8NCE0 465 aaKnown RBP9.26□□□□□ -0.93
CCDC59-207ENST00000552606 TMIEQ8NEW7 156 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 OR6K2Q8NGY2 324 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 PIP4K2CQ8TBX8 421 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 GRIN3AQ8TCU5 1115 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 RLN3Q8WXF3 142 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 ARRDC3Q96B67 414 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 HAUS1Q96CS2 278 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 NSMCE3Q96MG7 304 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 QKIQ96PU8 341 aaKnown RBP eCLIP9.26□□□□□ -0.93
CCDC59-207ENST00000552606 IL12RB2Q99665 862 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 CINPQ9BW66 212 aaPredicted RBP9.26□□□□□ -0.93
CCDC59-207ENST00000552606 HEMGNQ9BXL5 484 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 MAK16Q9BXY0 300 aaKnown RBP9.26□□□□□ -0.93
CCDC59-207ENST00000552606 EPC1Q9H2F5 836 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 FAM86C1Q9NVL1 165 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 SEPT3Q9UH03 358 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 IL36AQ9UHA7 158 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 SCML1Q9UN30 329 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 CYP8B1Q9UNU6 501 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 HEY1Q9Y5J3 304 aa9.26□□□□□ -0.93
CCDC59-207ENST00000552606 OTOGLQ3ZCN5 2332 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 A0A1W2PP55 124 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 TSPAN11A1L157 253 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 C1QTNF3-AMACRE9PGA6 284 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 PPP1R12AO14974 1030 aaPredicted RBP9.25□□□□□ -0.93
CCDC59-207ENST00000552606 MATN3O15232 486 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 INSIG1O15503 277 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 BNIP3LO60238 219 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 KIF5CO60282 957 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 ZNF217O75362 1048 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 RPP40O75818 363 aaKnown RBP9.25□□□□□ -0.93
CCDC59-207ENST00000552606 IL1BP01584 269 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 PRNPP04156 253 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 ATP1A1P05023 1023 aaKnown RBP9.25□□□□□ -0.93
CCDC59-207ENST00000552606 HLA-DQB2P05538 268 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 C5AR1P21730 350 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 ITGB7P26010 798 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 GKP32189 559 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 CNR2P34972 360 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 HSPA9P38646 679 aaKnown RBP9.25□□□□□ -0.93
CCDC59-207ENST00000552606 MMP13P45452 471 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 RECQLP46063 649 aaPredicted RBP9.25□□□□□ -0.93
CCDC59-207ENST00000552606 OTUD4Q01804 1114 aaKnown RBP9.25□□□□□ -0.93
CCDC59-207ENST00000552606 NHLH1Q02575 133 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 HNRNPDQ14103 355 aaKnown RBP9.25□□□□□ -0.93
CCDC59-207ENST00000552606 ZNF235Q14590 738 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 IHHQ14623 411 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 RPS6KA1Q15418 735 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 SIX1Q15475 284 aaPredicted RBP9.25□□□□□ -0.93
CCDC59-207ENST00000552606 TTC31Q49AM3 519 aaPredicted RBP9.25□□□□□ -0.93
CCDC59-207ENST00000552606 PIP5KL1Q5T9C9 394 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 SEL1L2Q5TEA6 688 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 PMS2CLQ68D20 193 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 ZC3H14Q6PJT7 736 aaKnown RBP9.25□□□□□ -0.93
CCDC59-207ENST00000552606 DSG4Q86SJ6 1040 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 C17orf53Q8N3J3 647 aaPredicted RBP9.25□□□□□ -0.93
CCDC59-207ENST00000552606 ACTL9Q8TC94 416 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 P3H4Q92791 437 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 HEPHQ9BQS7 1158 aa9.25□□□□□ -0.93
CCDC59-207ENST00000552606 CPEB1Q9BZB8 566 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms