RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 FBXO2Q9UK22 296 aaPredicted RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 SRPRBQ9Y5M8 271 aaKnown RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 CLIC4Q9Y696 253 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 ANKHD1Q8IWZ3 2542 aaKnown RBP5.53□□□□□ -1.52
HOXB3-213ENST00000552000 PDZD2O15018 2839 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 NF1P21359 2839 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 ZGRF1Q86YA3 2104 aa5.53□□□□□ -1.52
HOXB3-213ENST00000552000 NIPBLQ6KC79 2804 aaeCLIP5.52□□□□□ -1.532e-6■■■■□ 25.1
HOXB3-213ENST00000552000 A0A1W2PQU0 124 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 EME2A4GXA9 379 aaPredicted RBP5.52□□□□□ -1.53
HOXB3-213ENST00000552000 AGRPO00253 132 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 TULP2O00295 520 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 PLD2O14939 933 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 IRAK2O43187 625 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 SLC7A4O43246 635 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 ACSL4O60488 711 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 TCEA3O75764 348 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 MOCS3O95396 460 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 TGFB1P01137 390 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 IGLV1-40P01703 118 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 HGFP14210 728 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 WT1P19544 449 aaPredicted RBP5.52□□□□□ -1.53
HOXB3-213ENST00000552000 AKT2P31751 481 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 UGT1A5P35504 534 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 SOX11P35716 441 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 SLC11A2P49281 568 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 PDX1P52945 283 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 HNRNPKP61978 463 aaKnown RBP eCLIP5.52□□□□□ -1.53
HOXB3-213ENST00000552000 SNRPFP62306 86 aaKnown RBP5.52□□□□□ -1.53
HOXB3-213ENST00000552000 CLDN10P78369 228 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 CEBPZQ03701 1054 aaKnown RBP5.52□□□□□ -1.53
HOXB3-213ENST00000552000 ADIGQ0VDE8 80 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 SPIDRQ14159 915 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 NCAPHQ15003 741 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 DEFB133Q30KQ1 61 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 DCAF6Q58WW2 860 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 RAB41Q5JT25 222 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 MANEAQ5SRI9 462 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 FAM46CQ5VWP2 391 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 BSPRYQ5W0U4 402 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 PM20D1Q6GTS8 502 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 NADSYN1Q6IA69 706 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 ZCCHC8Q6NZY4 707 aaKnown RBP5.52□□□□□ -1.53
HOXB3-213ENST00000552000 GCNT7Q6ZNI0 430 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 BHLHA9Q7RTU4 235 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 BRAPQ7Z569 592 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 BTLAQ7Z6A9 289 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 B3GNT8Q7Z7M8 397 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 DSG4Q86SJ6 1040 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 C12orf56Q8IXR9 622 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 APCDD1Q8J025 514 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 SLC22A18ASQ8N1D0 253 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 CFAP52Q8N1V2 620 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 ZNF557Q8N988 423 aaPredicted RBP5.52□□□□□ -1.53
HOXB3-213ENST00000552000 ZNF548Q8NEK5 533 aaPredicted RBP5.52□□□□□ -1.53
HOXB3-213ENST00000552000 ZNF564Q8TBZ8 553 aaPredicted RBP5.52□□□□□ -1.53
HOXB3-213ENST00000552000 HTR3CQ8WXA8 447 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 FAM131CQ96AQ9 280 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 HEXIM2Q96MH2 286 aaKnown RBP5.52□□□□□ -1.53
HOXB3-213ENST00000552000 PRICKLE1Q96MT3 831 aaPredicted RBP5.52□□□□□ -1.53
HOXB3-213ENST00000552000 IPO9Q96P70 1041 aaKnown RBP5.52□□□□□ -1.53
HOXB3-213ENST00000552000 SPAG5Q96R06 1193 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 UBXN6Q9BZV1 441 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 NIF3L1Q9GZT8 377 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 MRPL18Q9H0U6 180 aaKnown RBP5.52□□□□□ -1.53
HOXB3-213ENST00000552000 ALG2Q9H553 416 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 CYP3A43Q9HB55 503 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 LRRC4Q9HBW1 653 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 EPB41L5Q9HCM4 733 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 PREBQ9HCU5 417 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 SARDHQ9UL12 918 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 SRPK3Q9UPE1 567 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 PCDHGA7Q9Y5G6 932 aa5.52□□□□□ -1.53
HOXB3-213ENST00000552000 TYW5A2RUC4 315 aaKnown RBP5.51□□□□□ -1.53
HOXB3-213ENST00000552000 YJEFN3A6XGL0 299 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 E7ENQ6 273 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 PCDH8O95206 1070 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 LUC7L3O95232 432 aaKnown RBP5.51□□□□□ -1.53
HOXB3-213ENST00000552000 MED26O95402 600 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 IGLV3-27P01718 113 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 LIPCP11150 499 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 NME1P15531 152 aaKnown RBP5.51□□□□□ -1.53
HOXB3-213ENST00000552000 PDGFRAP16234 1089 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 ZNF18P17022 549 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 HNRNPA2B1P22626 353 aaKnown RBP5.51□□□□□ -1.53
HOXB3-213ENST00000552000 CASP1P29466 404 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 NNMTP40261 264 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 CASRP41180 1078 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 CCR10P46092 362 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 TBX4P57082 545 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 SLC8A3P57103 927 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 TAS2R38P59533 333 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 FZD2Q14332 565 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 NR0B2Q15466 257 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 KNOP1Q1ED39 458 aaKnown RBP5.51□□□□□ -1.53
HOXB3-213ENST00000552000 GOLGA7BQ2TAP0 167 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 ZNF284Q2VY69 593 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 NUGGCQ68CJ6 796 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 MSANTD2Q6P1R3 559 aa5.51□□□□□ -1.53
HOXB3-213ENST00000552000 DNAJC14Q6Y2X3 702 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms