RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 METTL25Q8N6Q8 603 aa23.93■■□□□ 1.42
NPAS3-211ENST00000551634 FAM49AQ9H0Q0 323 aaPredicted RBP23.93■■□□□ 1.42
NPAS3-211ENST00000551634 MRPL46Q9H2W6 279 aaKnown RBP23.93■■□□□ 1.42
NPAS3-211ENST00000551634 CNGB3Q9NQW8 809 aa23.93■■□□□ 1.42
NPAS3-211ENST00000551634 ACSS2Q9NR19 701 aa23.93■■□□□ 1.42
NPAS3-211ENST00000551634 KLK14Q9P0G3 267 aa23.93■■□□□ 1.42
NPAS3-211ENST00000551634 AAR2Q9Y312 384 aaKnown RBP23.93■■□□□ 1.42
NPAS3-211ENST00000551634 JCHAINP01591 159 aa23.93■■□□□ 1.42
NPAS3-211ENST00000551634 FAM200BP0CF97 657 aa23.93■■□□□ 1.42
NPAS3-211ENST00000551634 SOX4Q06945 474 aaPredicted RBP23.93■■□□□ 1.42
NPAS3-211ENST00000551634 PTK2BQ14289 1009 aa23.93■■□□□ 1.42
NPAS3-211ENST00000551634 KLHDC10Q6PID8 442 aa23.93■■□□□ 1.42
NPAS3-211ENST00000551634 SLC41A1Q8IVJ1 513 aa23.93■■□□□ 1.42
NPAS3-211ENST00000551634 KLHL32Q96NJ5 620 aa23.93■■□□□ 1.42
NPAS3-211ENST00000551634 TSGA13Q96PP4 275 aa23.93■■□□□ 1.42
NPAS3-211ENST00000551634 OSMRQ99650 979 aa23.93■■□□□ 1.42
NPAS3-211ENST00000551634 MED10Q9BTT4 135 aa23.93■■□□□ 1.42
NPAS3-211ENST00000551634 MRPL1Q9BYD6 325 aaKnown RBP23.93■■□□□ 1.42
NPAS3-211ENST00000551634 HACD3Q9P035 362 aa23.93■■□□□ 1.42
NPAS3-211ENST00000551634 SUCOQ9UBS9 1254 aaKnown RBP23.93■■□□□ 1.42
NPAS3-211ENST00000551634 ARHGAP10A1A4S6 786 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 STMN1P16949 149 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 KPNA2P52292 529 aaKnown RBP23.92■■□□□ 1.42
NPAS3-211ENST00000551634 DNAJB13P59910 316 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 TTLL12Q14166 644 aaPredicted RBP23.92■■□□□ 1.42
NPAS3-211ENST00000551634 RNF148Q8N7C7 305 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 YJEFN3A6XGL0 299 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 SDHDO14521 159 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 TMCC1O94876 653 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 NR1H2P55055 460 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 MAP3K7CLP57077 242 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 COG7P83436 770 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 CCDC117Q8IWD4 279 aaPredicted RBP23.92■■□□□ 1.42
NPAS3-211ENST00000551634 SULF1Q8IWU6 871 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 TMA16Q96EY4 203 aaKnown RBP23.92■■□□□ 1.42
NPAS3-211ENST00000551634 FAR2Q96K12 515 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 MRPL57Q9BQC6 102 aaKnown RBP23.92■■□□□ 1.42
NPAS3-211ENST00000551634 KATNBL1Q9H079 304 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 GOLGA2P5Q9HBQ8 144 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 MRM3Q9HC36 420 aaKnown RBP23.92■■□□□ 1.42
NPAS3-211ENST00000551634 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.92■■□□□ 1.42
NPAS3-211ENST00000551634 ZNF236Q9UL36 1845 aa23.92■■□□□ 1.42
NPAS3-211ENST00000551634 STX16-NPEPL1H3BU86 382 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 GABRDO14764 452 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 MMP3P08254 477 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 YBX3P16989 372 aaKnown RBP eCLIP23.91■■□□□ 1.42
NPAS3-211ENST00000551634 AVPR1AP37288 418 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 STX5Q13190 355 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 MAPRE2Q15555 327 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 PELI3Q8N2H9 469 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 PRPF18Q99633 342 aaKnown RBP23.91■■□□□ 1.42
NPAS3-211ENST00000551634 NPAS2Q99743 824 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 COLEC11Q9BWP8 271 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 DDIT4Q9NX09 232 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 UBP1Q9NZI7 540 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 THEGQ9P2T0 379 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 APPL1Q9UKG1 709 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 PCDHGB4Q9UN71 923 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 PCDHGB5Q9Y5G0 923 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 FNDC1Q4ZHG4 1894 aaPredicted RBP23.91■■□□□ 1.42
NPAS3-211ENST00000551634 PGK1P00558 417 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 C8BP07358 591 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 SPATA31D3P0C874 917 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 CDKL1Q00532 357 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 TRIM25Q14258 630 aaKnown RBP23.91■■□□□ 1.42
NPAS3-211ENST00000551634 PPP2R5DQ14738 602 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 C6orf52Q5T4I8 152 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 TSTD2Q5T7W7 516 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 SPATA31D4Q6ZUB0 917 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 CHSY3Q70JA7 882 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 CCNYL1Q8N7R7 359 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 FAM81AQ8TBF8 368 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 DCPSQ96C86 337 aaKnown RBP23.91■■□□□ 1.42
NPAS3-211ENST00000551634 NXNL1Q96CM4 212 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 GRIP2Q9C0E4 1043 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 PHF24Q9UPV7 400 aa23.91■■□□□ 1.42
NPAS3-211ENST00000551634 FAM95CA0A1B0GW59 222 aa23.9■■□□□ 1.42
NPAS3-211ENST00000551634 RNASEH2AO75792 299 aaKnown RBP23.9■■□□□ 1.42
NPAS3-211ENST00000551634 PSME3P61289 254 aa23.9■■□□□ 1.42
NPAS3-211ENST00000551634 DGKDQ16760 1214 aa23.9■■□□□ 1.42
NPAS3-211ENST00000551634 ZFP28Q8NHY6 868 aa23.9■■□□□ 1.42
NPAS3-211ENST00000551634 PTCD2Q8WV60 388 aaKnown RBP23.9■■□□□ 1.42
NPAS3-211ENST00000551634 LENG1Q96BZ8 264 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-211ENST00000551634 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-211ENST00000551634 OR12D3Q9UGF7 316 aa23.9■■□□□ 1.42
NPAS3-211ENST00000551634 NCAM1P13591 858 aa23.9■■□□□ 1.42
NPAS3-211ENST00000551634 ZNF26P17031 533 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-211ENST00000551634 MYLK3Q32MK0 819 aa23.9■■□□□ 1.42
NPAS3-211ENST00000551634 IYDQ6PHW0 289 aa23.9■■□□□ 1.42
NPAS3-211ENST00000551634 GALNT4Q8N4A0 578 aa23.9■■□□□ 1.42
NPAS3-211ENST00000551634 MARK4Q96L34 752 aa23.9■■□□□ 1.42
NPAS3-211ENST00000551634 SENP6Q9GZR1 1112 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-211ENST00000551634 UNC93B1Q9H1C4 597 aa23.9■■□□□ 1.42
NPAS3-211ENST00000551634 A0A087X1B8 175 aa23.9■■□□□ 1.42
NPAS3-211ENST00000551634 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-211ENST00000551634 ADM5C9JUS6 153 aa23.9■■□□□ 1.42
NPAS3-211ENST00000551634 ATP5F1P24539 256 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-211ENST00000551634 LRPAP1P30533 357 aa23.9■■□□□ 1.42
NPAS3-211ENST00000551634 ZNF467Q7Z7K2 595 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-211ENST00000551634 SARDHQ9UL12 918 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms