RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 METTL12A8MUP2 240 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 PATE3B3GLJ2 98 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 TBC1D3LB9A6J9 549 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 APOL1O14791 398 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 NRDCO43847 1150 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 MAFKO60675 156 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 ZRANB2O95218 330 aaKnown RBP eCLIP13.94□□□□□ -0.18
TROAP-213ENST00000550709 FTCDO95954 541 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 PTMAP06454 111 aaKnown RBP13.94□□□□□ -0.18
TROAP-213ENST00000550709 TBC1D3HP0C7X1 549 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 KRT10P13645 584 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 TGM1P22735 817 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 HOXD11P31277 338 aaPredicted RBP13.94□□□□□ -0.18
TROAP-213ENST00000550709 CDKN2BP42772 138 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 RGRP47804 291 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 ADPRHP54922 357 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 CCZ1BP86790 482 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 CCZ1P86791 482 aaPredicted RBP13.94□□□□□ -0.18
TROAP-213ENST00000550709 RAD51Q06609 339 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 SLC10A7Q0GE19 358 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 SLC10A2Q12908 348 aaPredicted RBP13.94□□□□□ -0.18
TROAP-213ENST00000550709 LBRQ14739 615 aaKnown RBP13.94□□□□□ -0.18
TROAP-213ENST00000550709 IFI16Q16666 785 aaKnown RBP13.94□□□□□ -0.18
TROAP-213ENST00000550709 WDR45BQ5MNZ6 344 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 AGBL4Q5VU57 503 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 TBC1D3GQ6DHY5 549 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 TBC1D3CQ6IPX1 549 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 NPNTQ6UXI9 565 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 SPOCD1Q6ZMY3 1216 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 SYT12Q8IV01 421 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 CCDC50Q8IVM0 306 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 KATNAL2Q8IYT4 538 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 TBC1D3Q8IZP1 549 aaPredicted RBP13.94□□□□□ -0.18
TROAP-213ENST00000550709 LRRC57Q8N9N7 239 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 CCNYQ8ND76 341 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 OR2T34Q8NGX1 318 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 NSMCE1Q8WV22 266 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 PPP1R16AQ96I34 528 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 CALR3Q96L12 384 aaKnown RBP13.94□□□□□ -0.18
TROAP-213ENST00000550709 DTLQ9NZJ0 730 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 SEPT3Q9UH03 358 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 GUCA1BQ9UMX6 200 aa13.94□□□□□ -0.18
TROAP-213ENST00000550709 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.94□□□□□ -0.18
TROAP-213ENST00000550709 MUSKO15146 869 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 GJB3O75712 270 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 PIGNO95427 931 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 PEX11BO96011 259 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 CFIP05156 583 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 GARSP41250 739 aaKnown RBP13.93□□□□□ -0.18
TROAP-213ENST00000550709 GALNT2Q10471 571 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 ZNF235Q14590 738 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 RFTN1Q14699 578 aaPredicted RBP13.93□□□□□ -0.18
TROAP-213ENST00000550709 PIP5KL1Q5T9C9 394 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 KIAA0895LQ68EN5 471 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 FBXL19Q6PCT2 694 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 GDPD4Q6W3E5 623 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 ERN2Q76MJ5 926 aaKnown RBP13.93□□□□□ -0.18
TROAP-213ENST00000550709 PEX26Q7Z412 305 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 RCOR2Q8IZ40 523 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 PLD5Q8N7P1 536 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 BIRC7Q96CA5 298 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 ZNF830Q96NB3 372 aaPredicted RBP13.93□□□□□ -0.18
TROAP-213ENST00000550709 KLHL32Q96NJ5 620 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 ZNF599Q96NL3 588 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 HEMGNQ9BXL5 484 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 TSGA10Q9BZW7 698 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 VPS45Q9NRW7 570 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 EIF2B4Q9UI10 523 aaKnown RBP13.93□□□□□ -0.18
TROAP-213ENST00000550709 PILRBQ9UKJ0 227 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 PACSIN2Q9UNF0 486 aaPredicted RBP13.93□□□□□ -0.18
TROAP-213ENST00000550709 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.93□□□□□ -0.18
TROAP-213ENST00000550709 GVINP1Q7Z2Y8 2422 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 CKAP5Q14008 2032 aa13.93□□□□□ -0.18
TROAP-213ENST00000550709 DOCK4Q8N1I0 1966 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 C16orf96A6NNT2 1141 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 ZNF487B1APH4 448 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 PLRG1O43660 514 aaKnown RBP13.92□□□□□ -0.18
TROAP-213ENST00000550709 CST8O60676 142 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 CCDC175P0C221 793 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 ZNF806P0C7X5 589 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 ZFXP17010 805 aaPredicted RBP13.92□□□□□ -0.18
TROAP-213ENST00000550709 MX2P20592 715 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 ITGB7P26010 798 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 MAT2AP31153 395 aaKnown RBP13.92□□□□□ -0.18
TROAP-213ENST00000550709 CTNNA1P35221 906 aaKnown RBP13.92□□□□□ -0.18
TROAP-213ENST00000550709 MMP13P45452 471 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 SCNN1BP51168 640 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 NEK3P51956 506 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 TAS2R38P59533 333 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 PPP2CBP62714 309 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 PPP2CAP67775 309 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 CCDC15Q0P6D6 951 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 TFDP2Q14188 446 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 CSRP2Q16527 193 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 ZNF805Q5CZA5 627 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 LRRC73Q5JTD7 316 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 PLA2G2CQ5R387 149 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 MARC1Q5VT66 337 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 SLC9A4Q6AI14 798 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 B4GALNT4Q76KP1 1039 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms