RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 PDPK2PQ6A1A2 396 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 VITQ6UXI7 678 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 HDDC3Q8N4P3 179 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 BEND7Q8N7W2 519 aaPredicted RBP12.33□□□□□ -0.44
NR4A1-215ENST00000550557 ZNF461Q8TAF7 563 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 NDRG1Q92597 394 aaKnown RBP12.33□□□□□ -0.44
NR4A1-215ENST00000550557 VPS50Q96JG6 964 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 KREMEN1Q96MU8 473 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 BPIFA1Q9NP55 256 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 MTO1Q9Y2Z2 717 aaKnown RBP12.33□□□□□ -0.44
NR4A1-215ENST00000550557 A0A0A0MRY4 1105 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 DHX15O43143 795 aaKnown RBP12.33□□□□□ -0.44
NR4A1-215ENST00000550557 KRT6AP02538 564 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 KRT6BP04259 564 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 NFKB1P19838 968 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 LMO2P25791 158 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 KRT6CP48668 564 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 MARCKSL1P49006 195 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 YBEYP58557 167 aaPredicted RBP12.33□□□□□ -0.44
NR4A1-215ENST00000550557 CDK18Q07002 472 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 CRY1Q16526 586 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 MORN1Q5T089 497 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 PSTKQ8IV42 348 aaKnown RBP12.33□□□□□ -0.44
NR4A1-215ENST00000550557 KATNAL2Q8IYT4 538 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 WFIKKN2Q8TEU8 576 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 ALG3Q92685 438 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 ZNF333Q96JL9 665 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 FBXL18Q96ME1 805 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 SPATA13Q96N96 652 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 KLHL5Q96PQ7 755 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 RNF157Q96PX1 679 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 KCNK16Q96T55 309 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 SH3GL3Q99963 347 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 ZNF670Q9BS34 389 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 MANSC1Q9H8J5 431 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 MIEF1Q9NQG6 463 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 HAO1Q9UJM8 370 aa12.33□□□□□ -0.44
NR4A1-215ENST00000550557 KPNA5O15131 536 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 DRD4P21917 467 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 ATP6V1E1P36543 226 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 PRIM2P49643 509 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 CBX2Q14781 532 aaPredicted RBP12.32□□□□□ -0.44
NR4A1-215ENST00000550557 LRRC38Q5VT99 294 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 RGS9BPQ6ZS82 235 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 PHYKPLQ8IUZ5 450 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 BCO2Q9BYV7 579 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 KIF17Q9P2E2 1029 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 CACNG4Q9UBN1 327 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 GMEB2Q9UKD1 530 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 CDYLQ9Y232 598 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 MYH14Q7Z406 1995 aaKnown RBP12.32□□□□□ -0.44
NR4A1-215ENST00000550557 A0A1W2PQ67 120 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 GSAPA4D1B5 854 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 MYADML2A6NDP7 307 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 ISM1B1AKI9 464 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 SLC31A1O15431 190 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 CA3P07451 260 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 NUDT17P0C025 328 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 PIRTP0C851 137 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 HOXB8P17481 243 aaPredicted RBP12.32□□□□□ -0.44
NR4A1-215ENST00000550557 DGKAP23743 735 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 TIE1P35590 1138 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 CCNG1P51959 295 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 MRPS35P82673 323 aaKnown RBP12.32□□□□□ -0.44
NR4A1-215ENST00000550557 ILF3Q12906 894 aaKnown RBP eCLIP12.32□□□□□ -0.44
NR4A1-215ENST00000550557 PARP15Q460N3 678 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.32□□□□□ -0.44
NR4A1-215ENST00000550557 CMTR2Q8IYT2 770 aaKnown RBP12.32□□□□□ -0.44
NR4A1-215ENST00000550557 FAM9CQ8IZT9 166 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 OR10G6Q8NH81 332 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 DTX3LQ8TDB6 740 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 OTULINQ96BN8 352 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 PTPN18Q99952 460 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 ARL15Q9NXU5 204 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 EVLQ9UI08 416 aaPredicted RBP12.32□□□□□ -0.44
NR4A1-215ENST00000550557 F8W810 466 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 FTH1P02794 183 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 RB1P06400 928 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 ENO1P06733 434 aaKnown RBP12.32□□□□□ -0.44
NR4A1-215ENST00000550557 KCNK10P57789 538 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 RPL7AP62424 266 aaKnown RBP12.32□□□□□ -0.44
NR4A1-215ENST00000550557 TRIP4Q15650 581 aaPredicted RBP12.32□□□□□ -0.44
NR4A1-215ENST00000550557 NEPROQ6NW34 567 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 TMEM154Q6P9G4 183 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 MYO19Q96H55 970 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 ACOX2Q99424 681 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 C16orf70Q9BSU1 422 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 DCDC2Q9UHG0 476 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 CACNA1SQ13698 1873 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 WDR27A2RRH5 827 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 DDX3YO15523 660 aaKnown RBP12.32□□□□□ -0.44
NR4A1-215ENST00000550557 GALTP07902 379 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 RHOQP17081 205 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 PSMB4P28070 264 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 ALDH9A1P49189 494 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 PTPN20Q4JDL3 420 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 TXNDC8Q6A555 127 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 LRRC8EQ6NSJ5 796 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 CRTC3Q6UUV7 619 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 CES3Q6UWW8 571 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms