RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 Q6ZSR6 202 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 APTXQ7Z2E3 356 aaKnown RBP11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 MCOLN2Q8IZK6 566 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 CCDC185Q8N715 623 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 DENND6BQ8NEG7 585 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 HCAR2Q8TDS4 363 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 GDAP1L1Q96MZ0 367 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 MCEEQ96PE7 176 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 LENG8Q96PV6 779 aaPredicted RBP11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 DUSP23Q9BVJ7 150 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 C1QTNF7Q9BXJ2 289 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 EDEM3Q9BZQ6 932 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 ZDHHC6Q9H6R6 413 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 USP29Q9HBJ7 922 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 NCKIPSDQ9NZQ3 722 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 IPO11Q9UI26 975 aaKnown RBP11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 FAM208BQ5VWN6 2430 aa11.06□□□□□ -0.64
VTI1BP3-201ENST00000550220 A0A1W2PQC6 194 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 TCRBV5S1A1TA0A578 114 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 FAM72CH0Y354 149 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 H3BM21 787 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 TAF4O00268 1085 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 KRIT1O00522 736 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 TOR1BO14657 336 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 FPGTO14772 594 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 CCP110O43303 1012 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 CD160O95971 181 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 IGSF6O95976 241 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 PAK4O96013 591 aaPredicted RBP11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 GZMAP12544 262 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 PRLRP16471 622 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 DGKAP23743 735 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 ACP1P24666 158 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 ACADVLP49748 655 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 PTK2BQ14289 1009 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 PPP1R15BQ5SWA1 713 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 FAM72AQ5TYM5 149 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 SEL1L3Q68CR1 1132 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 FAM72DQ6L9T8 149 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 GDPD4Q6W3E5 623 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 KYAT3Q6YP21 454 aaKnown RBP11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 KANSL1Q7Z3B3 1105 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 IRF2BP2Q7Z5L9 587 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 TTC7BQ86TV6 843 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 FAM72BQ86X60 149 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 UMODL1-AS1Q8N2C9 162 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 AOPEPQ8N6M6 819 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 C1QTNF2Q9BXJ5 285 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 CALN1Q9BXU9 219 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 CPEB1Q9BZB8 566 aaKnown RBP11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 TM6SF2Q9BZW4 377 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 TTYH3Q9C0H2 523 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 HSD3B7Q9H2F3 369 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 RTN4Q9NQC3 1192 aaKnown RBP11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 NDFIP2Q9NV92 336 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 DKK3Q9UBP4 350 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 FZD10Q9ULW2 581 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 ZFR2Q9UPR6 939 aaKnown RBP11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 MFHAS1Q9Y4C4 1052 aa11.05□□□□□ -0.64
VTI1BP3-201ENST00000550220 CREB3O43889 395 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 RNF8O76064 485 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 GJB6O95452 261 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 ATP1A3P13637 1013 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 DUSP3P51452 185 aaPredicted RBP11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 NDST2P52849 883 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 RPL7AP62424 266 aaKnown RBP11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 DAB2P98082 770 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 MAMLD1Q13495 774 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 CAMK2BQ13554 666 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 PROX2Q3B8N5 592 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 ANO6Q4KMQ2 910 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 RAB6CQ53S08 254 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 PARS2Q7L3T8 475 aaKnown RBP11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 TMC6Q7Z403 805 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 PSTKQ8IV42 348 aaKnown RBP11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 SLC25A45Q8N413 288 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 OR13H1Q8NG92 308 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 OR4C6Q8NH72 309 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 FNIP1Q8TF40 1166 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 BTN2A2Q8WVV5 523 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 RFFLQ8WZ73 363 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 KLK6Q92876 244 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 NXPE2Q96DL1 559 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 TRIM11Q96F44 468 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 NRSN2Q9GZP1 204 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 RAB6CQ9H0N0 254 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 MRPL47Q9HD33 250 aaKnown RBP11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 SCUBE2Q9NQ36 999 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 NLGN3Q9NZ94 848 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 AIPL1Q9NZN9 384 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 NEU3Q9UQ49 428 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 CA5BQ9Y2D0 317 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 CSNK1G3Q9Y6M4 447 aa11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 GOLGA4Q13439 2230 aaKnown RBP11.04□□□□□ -0.64
VTI1BP3-201ENST00000550220 ACACAQ13085 2346 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 CHD6Q8TD26 2715 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 SPTY2D1-AS1A0A0U1RR47 76 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 IGLON5A6NGN9 336 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 RASA4BC9J798 803 aa11.03□□□□□ -0.64
VTI1BP3-201ENST00000550220 SCAMP1O15126 338 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms