RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 TPSB2P20231 275 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 LRRC74AQ0VAA2 488 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 NOGQ13253 232 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 TPSAB1Q15661 275 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 ANKS6Q68DC2 871 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 ACTR8Q9H981 624 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 AGO3Q9H9G7 860 aaKnown RBP15.17■□□□□ 0.02
CUX1-214ENST00000550008 BTRCQ9Y297 605 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 SLX4Q8IY92 1834 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 E9PAM4 449 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 PEX11AO75192 247 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 TSHRP16473 764 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 RAB10P61026 200 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 SLC34A1Q06495 639 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 KLF1Q13351 362 aaPredicted RBP15.17■□□□□ 0.02
CUX1-214ENST00000550008 TMEM40Q8WWA1 233 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 SLCO2A1Q92959 643 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 SEPHS2Q99611 448 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 PHACTR1Q9C0D0 580 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 CATSPERZQ9NTU4 200 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 DNMT3LQ9UJW3 386 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 ADAMTS5Q9UNA0 930 aa15.17■□□□□ 0.02
CUX1-214ENST00000550008 H2AFYO75367 372 aaKnown RBP15.16■□□□□ 0.02
CUX1-214ENST00000550008 GCATO75600 419 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 KPNA1P52294 538 aaPredicted RBP15.16■□□□□ 0.02
CUX1-214ENST00000550008 ARHGDIAP52565 204 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 TTLL9Q3SXZ7 439 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 AARS2Q5JTZ9 985 aaKnown RBP15.16■□□□□ 0.02
CUX1-214ENST00000550008 WASHC2DQ5SRD0 308 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 LRRC74BQ6ZQY2 392 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 FAM13CQ8NE31 585 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 OR7D4Q8NG98 312 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 METTL6Q8TCB7 284 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 NXNL1Q96CM4 212 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 SCLYQ96I15 445 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 CLUHO75153 1309 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 SYCE1LA8MT33 242 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 SLCO1B7G3V0H7 640 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 MRASO14807 208 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 GABRB2P47870 512 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 IRX1P78414 480 aaPredicted RBP15.16■□□□□ 0.02
CUX1-214ENST00000550008 SEMA5AQ13591 1074 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 GRB14Q14449 540 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 FAM187BQ17R55 369 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 NCBP2-AS2Q69YL0 99 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 ELMSAN1Q6PJG2 1045 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 CXorf38Q8TB03 319 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 GRIN3AQ8TCU5 1115 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 INPP5DQ92835 1189 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 UPF1Q92900 1129 aaKnown RBP eCLIP15.16■□□□□ 0.02
CUX1-214ENST00000550008 MRPL9Q9BYD2 267 aaKnown RBP15.16■□□□□ 0.02
CUX1-214ENST00000550008 THEGQ9P2T0 379 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 ANKRD36CQ5JPF3 1778 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 SAC3D1A6NKF1 404 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 AP2A1O95782 977 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 MZF1P28698 734 aaPredicted RBP15.16■□□□□ 0.02
CUX1-214ENST00000550008 ZNF252P-AS1Q0IIN9 211 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 VARS2Q5ST30 1063 aaKnown RBP15.16■□□□□ 0.02
CUX1-214ENST00000550008 FSTL4Q6MZW2 842 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 PRSS55Q6UWB4 352 aaPredicted RBP15.16■□□□□ 0.02
CUX1-214ENST00000550008 CRYBG2Q8N1P7 616 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 FNDC5Q8NAU1 212 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 HAUS8Q9BT25 410 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 MYH7BA7E2Y1 1941 aa15.16■□□□□ 0.02
CUX1-214ENST00000550008 CABYRO75952 493 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 BEST1O76090 585 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 LTA4HP09960 611 aaKnown RBP15.15■□□□□ 0.02
CUX1-214ENST00000550008 CDK18Q07002 472 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 SLC20A2Q08357 652 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 BNIP1Q12981 228 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 PQLC3Q8N755 202 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 BANPQ8N9N5 519 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 GSTCDQ8NEC7 633 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 TBATAQ96M53 351 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 FOPNLQ96NB1 174 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 PAAF1Q9BRP4 392 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 SEMA6AQ9H2E6 1030 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 ADAM28Q9UKQ2 775 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 STBD1O95210 358 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 FGFR3P22607 806 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 WARSP23381 471 aaKnown RBP15.15■□□□□ 0.02
CUX1-214ENST00000550008 PTDSS1P48651 473 aaKnown RBP15.15■□□□□ 0.02
CUX1-214ENST00000550008 ZNF132P52740 706 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 MRPS35P82673 323 aaKnown RBP15.15■□□□□ 0.02
CUX1-214ENST00000550008 FAR2Q96K12 515 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 ZNF317Q96PQ6 595 aaPredicted RBP15.15■□□□□ 0.02
CUX1-214ENST00000550008 CYP2S1Q96SQ9 504 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 ACBD6Q9BR61 282 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 HPS4Q9NQG7 708 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 BATF3Q9NR55 127 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 COL4A1P02462 1669 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 IGKV6D-21A0A0A0MT36 114 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 C9JVG2 144 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 HDAC3O15379 428 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 TBL1XO60907 577 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 PSMG1O95456 288 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 ZNF135P52742 658 aaPredicted RBP15.15■□□□□ 0.02
CUX1-214ENST00000550008 GTF2H3Q13889 308 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 IKBKEQ14164 716 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 SIX1Q15475 284 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms