RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 GSRP00390 522 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 CD48P09326 243 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 PRLRP16471 622 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 NOVA1P51513 510 aaKnown RBP16.03■□□□□ 0.16
DDX54-205ENST00000548786 CCR5P51681 352 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 NDST2P52849 883 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 CDH6P55285 790 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 SNRPD1P62314 119 aaKnown RBP16.03■□□□□ 0.16
DDX54-205ENST00000548786 MMRN1Q13201 1228 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 MESDQ14696 234 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 HLA-BQ31612 363 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 ATP13A4Q4VNC1 1196 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 BOLA3Q53S33 107 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 PARS2Q7L3T8 475 aaKnown RBP16.03■□□□□ 0.16
DDX54-205ENST00000548786 POLNQ7Z5Q5 900 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 ARHGAP12Q8IWW6 846 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 TC2NQ8N9U0 490 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 FAM131CQ96AQ9 280 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 ISG20Q96AZ6 181 aaKnown RBP16.03■□□□□ 0.16
DDX54-205ENST00000548786 GDAP1L1Q96MZ0 367 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 CSPG4P5Q96PW8 444 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 GAREM1Q9H706 876 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 SP110Q9HB58 689 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 UVRAGQ9P2Y5 699 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 ANKRD6Q9Y2G4 727 aa16.03■□□□□ 0.16
DDX54-205ENST00000548786 FNDC3AQ9Y2H6 1198 aaKnown RBP16.03■□□□□ 0.16
DDX54-205ENST00000548786 ASCC3Q8N3C0 2202 aaKnown RBP16.03■□□□□ 0.16
DDX54-205ENST00000548786 A0A1W2PQU0 124 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 INSIG1O15503 277 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 PRAMEF11O60813 436 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 PROSCO94903 275 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 KCNK5O95279 499 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 IGSF6O95976 241 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 WNT1P04628 370 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 TMEM253P0C7T8 217 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 ITGB7P26010 798 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 NEK3P51956 506 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 C21orf59P57076 290 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 TAS2R40P59535 323 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 IL9RQ01113 521 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 CYTH1Q15438 398 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 MYLK3Q32MK0 819 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 PRAMEF14Q5SWL7 426 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 ZFYVE27Q5T4F4 411 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 SEL1L3Q68CR1 1132 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 FBXL19Q6PCT2 694 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 TMCO3Q6UWJ1 677 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 SLC35G2Q8TBE7 412 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 KLHL32Q96NJ5 620 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 HDAC8Q9BY41 377 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 PDFQ9HBH1 243 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 FZD3Q9NPG1 666 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 DONSONQ9NYP3 566 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 LHX3Q9UBR4 397 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 ITM2BQ9Y287 266 aa16.02■□□□□ 0.16
DDX54-205ENST00000548786 TMEM131Q92545 1883 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 C16orf96A6NNT2 1141 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 SLC31A1O15431 190 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 PIGNO95427 931 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 POP4O95707 220 aaKnown RBP16.01■□□□□ 0.15
DDX54-205ENST00000548786 CER1O95813 267 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 ADRB3P13945 408 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 GRIA4P48058 902 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 HCAR3P49019 387 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 RACK1P63244 317 aaKnown RBP16.01■□□□□ 0.15
DDX54-205ENST00000548786 HADHQ16836 314 aaKnown RBP16.01■□□□□ 0.15
DDX54-205ENST00000548786 AFMIDQ63HM1 303 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 PRPF39Q86UA1 669 aaKnown RBP16.01■□□□□ 0.15
DDX54-205ENST00000548786 TEKT4Q8WW24 435 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 CAMK1GQ96NX5 476 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 CALN1Q9BXU9 219 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 ZDHHC5Q9C0B5 715 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 KDM4CQ9H3R0 1056 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 PREBQ9HCU5 417 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 DNAAF2Q9NVR5 837 aaKnown RBP16.01■□□□□ 0.15
DDX54-205ENST00000548786 GGT7Q9UJ14 662 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 TFR2Q9UP52 801 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 DOCK9Q9BZ29 2069 aa16.01■□□□□ 0.15
DDX54-205ENST00000548786 KNL1Q8NG31 2342 aa16■□□□□ 0.15
DDX54-205ENST00000548786 LATO43561 262 aa16■□□□□ 0.15
DDX54-205ENST00000548786 GJB3O75712 270 aa16■□□□□ 0.15
DDX54-205ENST00000548786 PALMO75781 387 aa16■□□□□ 0.15
DDX54-205ENST00000548786 MAP3K6O95382 1288 aa16■□□□□ 0.15
DDX54-205ENST00000548786 TNNT1P13805 278 aa16■□□□□ 0.15
DDX54-205ENST00000548786 CD59P13987 128 aa16■□□□□ 0.15
DDX54-205ENST00000548786 CD38P28907 300 aa16■□□□□ 0.15
DDX54-205ENST00000548786 ABL2P42684 1182 aa16■□□□□ 0.15
DDX54-205ENST00000548786 RGRP47804 291 aa16■□□□□ 0.15
DDX54-205ENST00000548786 CCDC15Q0P6D6 951 aa16■□□□□ 0.15
DDX54-205ENST00000548786 INO80DQ53TQ3 878 aaPredicted RBP16■□□□□ 0.15
DDX54-205ENST00000548786 ZNF805Q5CZA5 627 aa16■□□□□ 0.15
DDX54-205ENST00000548786 GDPD4Q6W3E5 623 aa16■□□□□ 0.15
DDX54-205ENST00000548786 TRIM69Q86WT6 500 aa16■□□□□ 0.15
DDX54-205ENST00000548786 KCTD6Q8NC69 237 aa16■□□□□ 0.15
DDX54-205ENST00000548786 TSEN2Q8NCE0 465 aaKnown RBP16■□□□□ 0.15
DDX54-205ENST00000548786 CASKIN2Q8WXE0 1202 aa16■□□□□ 0.15
DDX54-205ENST00000548786 VOPP1Q96AW1 172 aa16■□□□□ 0.15
DDX54-205ENST00000548786 CINPQ9BW66 212 aaPredicted RBP16■□□□□ 0.15
DDX54-205ENST00000548786 IPO11Q9UI26 975 aaKnown RBP16■□□□□ 0.15
DDX54-205ENST00000548786 ZFR2Q9UPR6 939 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms