RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 RHOQP17081 205 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 CCR10P46092 362 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 NDST2P52849 883 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 SESN3P58005 492 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 MAXP61244 160 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 SLC10A7Q0GE19 358 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 SEPT6Q14141 434 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 IHHQ14623 411 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 TAF11Q15544 211 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 CTXN3Q4LDR2 81 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 MAP3K21Q5TCX8 1036 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 PAXIP1Q6ZW49 1069 aaPredicted RBP18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 FSTL5Q8N475 847 aaPredicted RBP18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 SLC25A41Q8N5S1 370 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 RDH11Q8TC12 318 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 KLHL5Q96PQ7 755 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 ZYG11BQ9C0D3 744 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 NT5MQ9NPB1 228 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 TMEM248Q9NWD8 314 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 TARM1B6A8C7 271 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 NCF2P19878 526 aaPredicted RBP18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 GRIA4P48058 902 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 RAB10P61026 200 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 SLC25A3Q00325 362 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 DLG1Q12959 904 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 HNRNPDQ14103 355 aaKnown RBP18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 FAM171A1Q5VUB5 890 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 LIPMQ5VYY2 423 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 ZNF470Q6ECI4 717 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 KIAA0930Q6ICG6 404 aaPredicted RBP18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 ARHGAP18Q8N392 663 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 C2CD4AQ8NCU7 369 aaPredicted RBP18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 STYXQ8WUJ0 223 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 IGSF8Q969P0 613 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 IMP4Q96G21 291 aaKnown RBP18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 SCYL1Q96KG9 808 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 GPR78Q96P69 363 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 PANX3Q96QZ0 392 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 SLC7A8Q9UHI5 535 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 MID2Q9UJV3 735 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 ACOT9Q9Y305 439 aa18.75■□□□□ 0.59
PRPF40B-208ENST00000548436 SYN3O14994 580 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 TBX10O75333 385 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 ALDH1A1P00352 501 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 MPSTP25325 297 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 MAGEA11P43364 429 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 SP3Q02447 781 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 MRPL58Q14197 206 aaKnown RBP18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 CFAP157Q5JU67 520 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 LRRC8EQ6NSJ5 796 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 NET1Q7Z628 596 aaPredicted RBP18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 PHTF2Q8N3S3 785 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 SPATA6LQ8N4H0 392 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 SHKBP1Q8TBC3 707 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 DTX3LQ8TDB6 740 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 NRG4Q8WWG1 115 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 NXNL1Q96CM4 212 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 TSNARE1Q96NA8 513 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 ANKRD27Q96NW4 1050 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 GPR62Q9BZJ7 368 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 SHCBP1LQ9BZQ2 653 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 UBE2OQ9C0C9 1292 aaKnown RBP18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 DRC3Q9H069 523 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 ARNT2Q9HBZ2 717 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 ATP13A1Q9HD20 1204 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 STOML1Q9UBI4 398 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 SLC27A5Q9Y2P5 690 aa18.74■□□□□ 0.59
PRPF40B-208ENST00000548436 IGLV3-10A0A075B6K4 115 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 A0A088AWK7 358 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 FAM92AA1XBS5 289 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 AURKAO14965 403 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 ZBTB14O43829 449 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 MMP2P08253 660 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 COL6A2P12110 1019 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 STMN1P16949 149 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 PAMP19021 973 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 YWHAQP27348 245 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 GCKP35557 465 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 CD86P42081 329 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 RENBPP51606 427 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 ARPP19P56211 112 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 ITKQ08881 620 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 CCDC6Q16204 474 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 LCA5Q86VQ0 697 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 MIB1Q86YT6 1006 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 CFAP61Q8NHU2 1237 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 STMN2Q93045 179 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 FBXO32Q969P5 355 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 PSMG2Q969U7 264 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 NAF1Q96HR8 494 aaKnown RBP18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 UNKQ9C0B0 810 aaKnown RBP18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 ILKAPQ9H0C8 392 aaPredicted RBP18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 TTC24A2A3L6 582 aaPredicted RBP18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 E9PBE3 544 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 KLHL41O60662 606 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 POLD2P49005 469 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 COPAP53621 1224 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 CLNS1AP54105 237 aaKnown RBP18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 TAS2R39P59534 338 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms