RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 ZDHHC24Q6UX98 284 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 SFTPA1Q8IWL2 248 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 KLHDC8BQ8IXV7 354 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 ARRDC2Q8TBH0 407 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 FBXO25Q8TCJ0 367 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 PRCCQ92733 491 aaPredicted RBP29.18■■■□□ 2.26
BRF1-213ENST00000548421 OXNAD1Q96HP4 312 aaPredicted RBP29.18■■■□□ 2.26
BRF1-213ENST00000548421 ZDHHC18Q9NUE0 388 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 SLCO3A1Q9UIG8 710 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 NFU1Q9UMS0 254 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 PLA2G4CQ9UP65 541 aa29.18■■■□□ 2.26
BRF1-213ENST00000548421 ERI2A8K979 691 aaKnown RBP29.17■■■□□ 2.26
BRF1-213ENST00000548421 ATP9BO43861 1147 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 CR2P20023 1033 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 ST8SIA6P61647 398 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 ACCSLQ4AC99 568 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 TXNDC11Q6PKC3 985 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 SPATA22Q8NHS9 363 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 NUDCD1Q96RS6 583 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 RBM15Q96T37 977 aaKnown RBP eCLIP29.17■■■□□ 2.26
BRF1-213ENST00000548421 MLPHQ9BV36 600 aaPredicted RBP29.17■■■□□ 2.26
BRF1-213ENST00000548421 FBRSL1Q9HCM7 1045 aaKnown RBP29.17■■■□□ 2.26
BRF1-213ENST00000548421 SCUBE2Q9NQ36 999 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 SLC8A2Q9UPR5 921 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 TCRBV7S3A2A0A539 114 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 C19orf67A6NJJ6 358 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 ZNF821O75541 412 aaPredicted RBP29.17■■■□□ 2.26
BRF1-213ENST00000548421 ECHS1P30084 290 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 CD86P42081 329 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 SCNN1BP51168 640 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 GEMP55040 296 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 CDK16Q00536 496 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 DLG2Q15700 870 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 RALGPS1Q5JS13 557 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 DGKKQ5KSL6 1271 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 SYCP2LQ5T4T6 812 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 CCNI2Q6ZMN8 369 aaPredicted RBP29.17■■■□□ 2.26
BRF1-213ENST00000548421 PRPF39Q86UA1 669 aaKnown RBP29.17■■■□□ 2.26
BRF1-213ENST00000548421 PCDH20Q8N6Y1 951 aaKnown RBP29.17■■■□□ 2.26
BRF1-213ENST00000548421 PDCD7Q8N8D1 485 aaKnown RBP29.17■■■□□ 2.26
BRF1-213ENST00000548421 KDM1BQ8NB78 822 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 ATXN2LQ8WWM7 1075 aaKnown RBP29.17■■■□□ 2.26
BRF1-213ENST00000548421 MYO19Q96H55 970 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 TM6SF2Q9BZW4 377 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 NEUROG2Q9H2A3 272 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 VPS45Q9NRW7 570 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 UBP1Q9NZI7 540 aa29.17■■■□□ 2.26
BRF1-213ENST00000548421 ANKRD36A6QL64 1941 aa29.16■■■□□ 2.26
BRF1-213ENST00000548421 F5P12259 2224 aa29.16■■■□□ 2.26
BRF1-213ENST00000548421 TTC24A2A3L6 582 aaPredicted RBP29.16■■■□□ 2.26
BRF1-213ENST00000548421 INSIG1O15503 277 aa29.16■■■□□ 2.26
BRF1-213ENST00000548421 PSMD3O43242 534 aa29.16■■■□□ 2.26
BRF1-213ENST00000548421 TMEM63AO94886 807 aa29.16■■■□□ 2.26
BRF1-213ENST00000548421 AP2A1O95782 977 aa29.16■■■□□ 2.26
BRF1-213ENST00000548421 IGSF6O95976 241 aa29.16■■■□□ 2.26
BRF1-213ENST00000548421 MT-CYBP00156 380 aaPredicted RBP29.16■■■□□ 2.26
BRF1-213ENST00000548421 MMP2P08253 660 aa29.16■■■□□ 2.26
BRF1-213ENST00000548421 TNFRSF4P43489 277 aa29.16■■■□□ 2.26
BRF1-213ENST00000548421 MPP3Q13368 585 aa29.16■■■□□ 2.26
BRF1-213ENST00000548421 KCTD11Q693B1 232 aa29.16■■■□□ 2.26
BRF1-213ENST00000548421 RNF135Q8IUD6 432 aa29.16■■■□□ 2.26
BRF1-213ENST00000548421 FAM153AQ9UHL3 310 aa29.16■■■□□ 2.26
BRF1-213ENST00000548421 SORCS3Q9UPU3 1222 aa29.16■■■□□ 2.26
BRF1-213ENST00000548421 GJB3O75712 270 aa29.15■■■□□ 2.26
BRF1-213ENST00000548421 GSRP00390 522 aa29.15■■■□□ 2.26
BRF1-213ENST00000548421 SERPINF2P08697 491 aa29.15■■■□□ 2.26
BRF1-213ENST00000548421 SNRPD1P62314 119 aaKnown RBP29.15■■■□□ 2.26
BRF1-213ENST00000548421 SKOR1P84550 965 aa29.15■■■□□ 2.26
BRF1-213ENST00000548421 SLC14A2Q15849 920 aa29.15■■■□□ 2.26
BRF1-213ENST00000548421 ATXN7L2Q5T6C5 722 aaPredicted RBP29.15■■■□□ 2.26
BRF1-213ENST00000548421 OR2AP1Q8NGE2 309 aa29.15■■■□□ 2.26
BRF1-213ENST00000548421 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP29.15■■■□□ 2.26
BRF1-213ENST00000548421 TADA1Q96BN2 335 aa29.15■■■□□ 2.26
BRF1-213ENST00000548421 GDAP1L1Q96MZ0 367 aa29.15■■■□□ 2.26
BRF1-213ENST00000548421 TNKS2Q9H2K2 1166 aa29.15■■■□□ 2.26
BRF1-213ENST00000548421 LRRC40Q9H9A6 602 aa29.15■■■□□ 2.26
BRF1-213ENST00000548421 NOD2Q9HC29 1040 aa29.15■■■□□ 2.26
BRF1-213ENST00000548421 MTRF1LQ9UGC7 380 aaKnown RBP29.15■■■□□ 2.26
BRF1-213ENST00000548421 STARD13Q9Y3M8 1113 aa29.15■■■□□ 2.26
BRF1-213ENST00000548421 MYBL2P10244 700 aa29.14■■■□□ 2.26
BRF1-213ENST00000548421 CSNK1DP48730 415 aa29.14■■■□□ 2.26
BRF1-213ENST00000548421 PON2Q15165 354 aa29.14■■■□□ 2.26
BRF1-213ENST00000548421 E2F5Q15329 346 aa29.14■■■□□ 2.26
BRF1-213ENST00000548421 FNDC3BQ53EP0 1204 aaKnown RBP29.14■■■□□ 2.26
BRF1-213ENST00000548421 SLC44A4Q53GD3 710 aa29.14■■■□□ 2.26
BRF1-213ENST00000548421 IER5LQ5T953 404 aa29.14■■■□□ 2.26
BRF1-213ENST00000548421 FMO2Q99518 471 aa29.14■■■□□ 2.26
BRF1-213ENST00000548421 TTC34A8MYJ7 566 aa29.13■■■□□ 2.25
BRF1-213ENST00000548421 SUN1O94901 812 aa29.13■■■□□ 2.25
BRF1-213ENST00000548421 MAPK8P45983 427 aa29.13■■■□□ 2.25
BRF1-213ENST00000548421 AP1S1P61966 158 aa29.13■■■□□ 2.25
BRF1-213ENST00000548421 ZNF234Q14588 700 aa29.13■■■□□ 2.25
BRF1-213ENST00000548421 TMEM196Q5HYL7 178 aa29.13■■■□□ 2.25
BRF1-213ENST00000548421 PPP1R21Q6ZMI0 780 aa29.13■■■□□ 2.25
BRF1-213ENST00000548421 SRLQ86TD4 932 aa29.13■■■□□ 2.25
BRF1-213ENST00000548421 GSPT2Q8IYD1 628 aaKnown RBP29.13■■■□□ 2.25
BRF1-213ENST00000548421 MCUQ8NE86 351 aa29.13■■■□□ 2.25
BRF1-213ENST00000548421 FRS2Q8WU20 508 aa29.13■■■□□ 2.25
BRF1-213ENST00000548421 THAP10Q9P2Z0 257 aaPredicted RBP29.13■■■□□ 2.25
BRF1-213ENST00000548421 TCF20Q9UGU0 1960 aaKnown RBP29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms