RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 ENTPD1P49961 510 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 CDH15P55291 814 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 ROR2Q01974 943 aaKnown RBP4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 SLC18A2Q05940 514 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 GPR18Q14330 331 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 GPR68Q15743 365 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 PLEKHO1Q53GL0 409 aaPredicted RBP4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 ZNF766Q5HY98 468 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 OTUD1Q5VV17 481 aaPredicted RBP4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 ATG9BQ674R7 924 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 CHD1LQ86WJ1 897 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 ESX1Q8N693 406 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 TSPYL6Q8N831 410 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 RUFY2Q8WXA3 655 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 ZBTB9Q96C00 473 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 GFM1Q96RP9 751 aaKnown RBP4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 RBM38Q9H0Z9 239 aaKnown RBP4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 PLAC1Q9HBJ0 212 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 SPATS2LQ9NUQ6 558 aaKnown RBP4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 HIF1ANQ9NWT6 349 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 PLK2Q9NYY3 685 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 IL1RAPL1Q9NZN1 696 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 NCKIPSDQ9NZQ3 722 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 SLC25A10Q9UBX3 287 aaPredicted RBP4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 CRYL1Q9Y2S2 319 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 PCDHGB5Q9Y5G0 923 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 RAI2Q9Y5P3 530 aa4.41□□□□□ -1.7
DEPDC4-205ENST00000548313 EBAG9O00559 213 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 HNRNPA1P09651 372 aaKnown RBP eCLIP4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 CD72P21854 359 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 CDC25AP30304 524 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 PPP3CCP48454 512 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 YWHAZP63104 245 aaKnown RBP4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 CYP4A11Q02928 519 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 DNTTIP2Q5QJE6 756 aaKnown RBP4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 INTS11Q5TA45 600 aaKnown RBP4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 MMS22LQ6ZRQ5 1243 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 C9orf47Q6ZRZ4 202 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 Q6ZTK2 550 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 CTU1Q7Z7A3 348 aaKnown RBP4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 PATL1Q86TB9 770 aaKnown RBP4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 MON1AQ86VX9 555 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 C11orf65Q8NCR3 313 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 GDPD5Q8WTR4 605 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 ATOH1Q92858 354 aaPredicted RBP4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 RNF183Q96D59 192 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 ELP4Q96EB1 424 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 URB1-AS1Q96HZ7 61 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 SF3B5Q9BWJ5 86 aaKnown RBP4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 POLDIP3Q9BY77 421 aaKnown RBP4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 WDR6Q9NNW5 1121 aaKnown RBP4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 IL36RNQ9UBH0 155 aa4.4□□□□□ -1.71
DEPDC4-205ENST00000548313 VWA5AO00534 786 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 TSPAN4O14817 238 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 TNFRSF13BO14836 293 aaPredicted RBP4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 INSIG1O15503 277 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 SPRY3O43610 288 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 ZNF8P17098 575 aaPredicted RBP4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 HOXB6P17509 224 aaKnown RBP4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 PTPN2P17706 415 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 CTPS1P17812 591 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 ARL1P40616 181 aaPredicted RBP4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 LIFRP42702 1097 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 TMPRSS3P57727 454 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 RPP30P78346 268 aaKnown RBP4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 ODF3L2Q3SX64 289 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 DCAF6Q58WW2 860 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 PDXDC1Q6P996 788 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 PALB2Q86YC2 1186 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 CERS3Q8IU89 383 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 CADM3Q8N126 398 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 RASSF8Q8NHQ8 419 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 TBC1D22AQ8WUA7 517 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 TMEM18Q96B42 140 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 OTULINQ96BN8 352 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 ZBTB10Q96DT7 871 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 APOPT1Q96IL0 206 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 CDT1Q9H211 546 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 SLC32A1Q9H598 525 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 MVB12BQ9H7P6 319 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 PEMTQ9UBM1 199 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 TMEM98Q9Y2Y6 226 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 SRPRBQ9Y5M8 271 aaKnown RBP4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 CYP46A1Q9Y6A2 500 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 ADGRF5Q8IZF2 1346 aa4.39□□□□□ -1.71
DEPDC4-205ENST00000548313 PABPN1LA6NDY0 278 aaKnown RBP4.38□□□□□ -1.71
DEPDC4-205ENST00000548313 OR6C75A6NL08 312 aa4.38□□□□□ -1.71
DEPDC4-205ENST00000548313 BECN2A8MW95 431 aa4.38□□□□□ -1.71
DEPDC4-205ENST00000548313 CLDN7O95471 211 aa4.38□□□□□ -1.71
DEPDC4-205ENST00000548313 LCATP04180 440 aa4.38□□□□□ -1.71
DEPDC4-205ENST00000548313 URODP06132 367 aa4.38□□□□□ -1.71
DEPDC4-205ENST00000548313 HOXD3P31249 432 aaPredicted RBP4.38□□□□□ -1.71
DEPDC4-205ENST00000548313 TTKP33981 857 aa4.38□□□□□ -1.71
DEPDC4-205ENST00000548313 FOXG1P55316 489 aaPredicted RBP4.38□□□□□ -1.71
DEPDC4-205ENST00000548313 LINC00205P59089 165 aa4.38□□□□□ -1.71
DEPDC4-205ENST00000548313 ADORA2A-AS1P86434 159 aa4.38□□□□□ -1.71
DEPDC4-205ENST00000548313 KRTAP5-11Q6L8G4 156 aa4.38□□□□□ -1.71
DEPDC4-205ENST00000548313 SLC22A25Q6T423 547 aa4.38□□□□□ -1.71
DEPDC4-205ENST00000548313 MON1BQ7L1V2 547 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms