RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 KCTD11Q693B1 232 aa17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 ALG1LQ6GMV1 187 aa17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 CENPUQ71F23 418 aa17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 METTL3Q86U44 580 aaKnown RBP17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 ETFBKMTQ8IXQ9 262 aa17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 PDIK1LQ8N165 341 aa17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 MREGQ8N565 214 aa17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 WFIKKN2Q8TEU8 576 aa17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 IMP4Q96G21 291 aaKnown RBP17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 OXNAD1Q96HP4 312 aaPredicted RBP17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 RBM15Q96T37 977 aaKnown RBP eCLIP17.14■□□□□ 0.332e-6■■□□□ 13.1
ARFGAP1-220ENST00000547204 MGME1Q9BQP7 344 aa17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 TXLNGYQ9BZA5 131 aa17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 LRRC40Q9H9A6 602 aa17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 XAB2Q9HCS7 855 aaKnown RBP17.14■□□□□ 0.33
ARFGAP1-220ENST00000547204 OTOL1A6NHN0 477 aaPredicted RBP17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 MUSKO15146 869 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 EIF3HO15372 352 aaKnown RBP eCLIP17.13■□□□□ 0.333e-12■■■□□ 15.7
ARFGAP1-220ENST00000547204 TULP3O75386 442 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 SUN1O94901 812 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 CISD3P0C7P0 127 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 DSC2Q02487 901 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 SULT2A1Q06520 285 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 GAB4Q2WGN9 574 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 ADIPOR2Q86V24 386 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 C12orf40Q86WS4 652 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 TSEN2Q8NCE0 465 aaKnown RBP17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 SPATA22Q8NHS9 363 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 ARRDC2Q8TBH0 407 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 SERPINB12Q96P63 405 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 RPP25Q9BUL9 199 aaKnown RBP17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 KCNK12Q9HB15 430 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 VPS45Q9NRW7 570 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 SLC25A13Q9UJS0 675 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 SLC27A6Q9Y2P4 619 aa17.13■□□□□ 0.33
ARFGAP1-220ENST00000547204 MT-CYBP00156 380 aaPredicted RBP17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 MLNP12872 115 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 CES1P23141 567 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 PMS2P54278 862 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 NIPAL4Q0D2K0 466 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 MPP3Q13368 585 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 TDGQ13569 410 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 FNBP1LQ5T0N5 605 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 IER5LQ5T953 404 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 MBLAC2Q68D91 279 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 GRAMD4Q6IC98 578 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 LRRC8BQ6P9F7 803 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 ZNF534Q76KX8 674 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 PRPF39Q86UA1 669 aaKnown RBP17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 CAND1Q86VP6 1230 aaKnown RBP17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 RELL1Q8IUW5 271 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 TTC17Q96AE7 1141 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 SEMA3CQ99985 751 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 SAYSD1Q9NPB0 183 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 UBP1Q9NZI7 540 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 DEC1Q9P2X7 70 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 LHX3Q9UBR4 397 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 KIAA1549LQ6ZVL6 1849 aa17.12■□□□□ 0.33
ARFGAP1-220ENST00000547204 ZDBF2Q9HCK1 2354 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 E7ESA3 106 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 ARNTLO00327 626 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 TRIM24O15164 1050 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 MT-CO1P00395 513 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 MMP2P08253 660 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 POLR2EP19388 210 aaKnown RBP17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 CD86P42081 329 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 CTSOP43234 321 aaPredicted RBP17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 RHOAP61586 193 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 NHLH1Q02575 133 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 PDIA2Q13087 525 aaKnown RBP17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 CBLBQ13191 982 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 SPARCL1Q14515 664 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 SLC14A2Q15849 920 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 GEN1Q17RS7 908 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 ITPRIPL2Q3MIP1 535 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 DNAJC21Q5F1R6 531 aaKnown RBP17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 SPDYCQ5MJ68 293 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 NAPEPLDQ6IQ20 393 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 KDELC1Q6UW63 502 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 HDXQ7Z353 690 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 LINC00523Q86TU6 105 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 PRSS33Q8NF86 280 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 IPMKQ8NFU5 416 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 TADA1Q96BN2 335 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 NUDCD1Q96RS6 583 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 BRD9Q9H8M2 597 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 GTSE1Q9NYZ3 720 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 DUSP12Q9UNI6 340 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 HS3ST2Q9Y278 367 aa17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 FCF1Q9Y324 198 aaKnown RBP17.11■□□□□ 0.33
ARFGAP1-220ENST00000547204 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 K7ERQ8 282 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 PMPCBO75439 489 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 ASLP04424 464 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 CR2P20023 1033 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 GJA4P35212 333 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 GRIA1P42261 906 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 MAGEA3P43357 314 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms