RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 ZNF830Q96NB3 372 aaPredicted RBP14.69□□□□□ -0.06
DDX54-203ENST00000546869 OLFM3Q96PB7 478 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 ALS2CR12Q96Q35 445 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 TUBGCP5Q96RT8 1024 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 PHOX2BQ99453 314 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 OMDQ99983 421 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 NEUROG2Q9H2A3 272 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 LZTFL1Q9NQ48 299 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 INVSQ9Y283 1065 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 PCDHGA5Q9Y5G8 931 aa14.69□□□□□ -0.06
DDX54-203ENST00000546869 PRR23AA6NEV1 266 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 METTL12A8MUP2 240 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 ZSCAN12O43309 604 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 BNIP3LO60238 219 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 CST8O60676 142 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 LRP3O75074 770 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 NDUFS2O75306 463 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 RNASEH2AO75792 299 aaKnown RBP14.68□□□□□ -0.06
DDX54-203ENST00000546869 PYGMP11217 842 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 KRT10P13645 584 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 CES1P23141 567 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 ITGB7P26010 798 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 RPL6Q02878 288 aaKnown RBP14.68□□□□□ -0.06
DDX54-203ENST00000546869 MEI1Q5TIA1 1274 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 CCDC50Q8IVM0 306 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 HDDC3Q8N4P3 179 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 TSEN2Q8NCE0 465 aaKnown RBP14.68□□□□□ -0.06
DDX54-203ENST00000546869 SPOCK2Q92563 424 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 ZNF641Q96N77 438 aaPredicted RBP14.68□□□□□ -0.06
DDX54-203ENST00000546869 CINPQ9BW66 212 aaPredicted RBP14.68□□□□□ -0.06
DDX54-203ENST00000546869 TM6SF2Q9BZW4 377 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 CD93Q9NPY3 652 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 NUP205Q92621 2012 aa14.68□□□□□ -0.06
DDX54-203ENST00000546869 A0A1W2PP55 124 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 APOC4-APOC2K7ER74 178 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 PPP1R12AO14974 1030 aaPredicted RBP14.67□□□□□ -0.06
DDX54-203ENST00000546869 EPN2O95208 641 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 FTCDO95954 541 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 APOC2P02655 101 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 CR2P20023 1033 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 ACSL1P33121 698 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 HOXD12P35452 270 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 MMP13P45452 471 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 AP1S1P61966 158 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 ADCY2Q08462 1091 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 CNTN1Q12860 1018 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 ZNF805Q5CZA5 627 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 ATXN7L2Q5T6C5 722 aaPredicted RBP14.67□□□□□ -0.06
DDX54-203ENST00000546869 ALG1LQ6GMV1 187 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 NEK5Q6P3R8 708 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 GDPD4Q6W3E5 623 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 ERN2Q76MJ5 926 aaKnown RBP14.67□□□□□ -0.06
DDX54-203ENST00000546869 SRLQ86TD4 932 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 REXO1L1PQ8IX06 675 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 CCDC13Q8IYE1 715 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 RUBCNQ92622 972 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 P3H4Q92791 437 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 MGME1Q9BQP7 344 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 OSBPL8Q9BZF1 889 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 DYRK4Q9NR20 520 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 HAUS2Q9NVX0 235 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 DKK3Q9UBP4 350 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 SERGEFQ9UGK8 458 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 HEY1Q9Y5J3 304 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 EML5Q05BV3 1969 aa14.67□□□□□ -0.06
DDX54-203ENST00000546869 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 BCLAF3A2AJT9 711 aaKnown RBP14.66□□□□□ -0.06
DDX54-203ENST00000546869 LRRC72A6NJI9 287 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 KPNA3O00505 521 aaPredicted RBP14.66□□□□□ -0.06
DDX54-203ENST00000546869 KRIT1O00522 736 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 MUSKO15146 869 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 PLRG1O43660 514 aaKnown RBP14.66□□□□□ -0.06
DDX54-203ENST00000546869 TJP3O95049 919 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 SEMA4FO95754 770 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 CCNB1P14635 433 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 SUOXP51687 545 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 METAP1P53582 386 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 IFI35P80217 286 aaPredicted RBP14.66□□□□□ -0.06
DDX54-203ENST00000546869 XRCC4Q13426 336 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 ZNF235Q14590 738 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 PIP5KL1Q5T9C9 394 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 AGBL4Q5VU57 503 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 PEAR1Q5VY43 1037 aaPredicted RBP14.66□□□□□ -0.06
DDX54-203ENST00000546869 KAZNQ674X7 775 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.66□□□□□ -0.06
DDX54-203ENST00000546869 ASCL5Q7RTU5 278 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 CACUL1Q86Y37 369 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 SLC41A1Q8IVJ1 513 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 TMEFF1Q8IYR6 380 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 RYBPQ8N488 228 aaPredicted RBP14.66□□□□□ -0.06
DDX54-203ENST00000546869 CCNYQ8ND76 341 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 OR2T34Q8NGX1 318 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 GANCQ8TET4 914 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 DNASE2BQ8WZ79 361 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 RAB7BQ96AH8 199 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 ARRDC3Q96B67 414 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 NUDCD1Q96RS6 583 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 IL12RB2Q99665 862 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 GPR174Q9BXC1 333 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 ZDHHC6Q9H6R6 413 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms