RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 ST8SIA6P61647 398 aa13.68□□□□□ -0.22
RAB5B-203ENST00000546810 CXorf57Q6NSI4 855 aaKnown RBP13.68□□□□□ -0.22
RAB5B-203ENST00000546810 ZNF662Q6ZS27 426 aa13.68□□□□□ -0.22
RAB5B-203ENST00000546810 RFX8Q6ZV50 586 aa13.68□□□□□ -0.22
RAB5B-203ENST00000546810 METTL3Q86U44 580 aaKnown RBP13.68□□□□□ -0.22
RAB5B-203ENST00000546810 NLRP14Q86W24 1093 aa13.68□□□□□ -0.22
RAB5B-203ENST00000546810 RTL3Q8N8U3 475 aaKnown RBP13.68□□□□□ -0.22
RAB5B-203ENST00000546810 KIAA1524Q8TCG1 905 aa13.68□□□□□ -0.22
RAB5B-203ENST00000546810 LMLNQ96KR4 655 aa13.68□□□□□ -0.22
RAB5B-203ENST00000546810 C2orf49Q9BVC5 232 aaPredicted RBP13.68□□□□□ -0.22
RAB5B-203ENST00000546810 MAGEB5Q9BZ81 275 aa13.68□□□□□ -0.22
RAB5B-203ENST00000546810 USP36Q9P275 1121 aaKnown RBP13.68□□□□□ -0.22
RAB5B-203ENST00000546810 RCOR3Q9P2K3 495 aaPredicted RBP13.68□□□□□ -0.22
RAB5B-203ENST00000546810 EIF2B4Q9UI10 523 aaKnown RBP13.68□□□□□ -0.22
RAB5B-203ENST00000546810 VPS28Q9UK41 221 aa13.68□□□□□ -0.22
RAB5B-203ENST00000546810 AK5Q9Y6K8 562 aa13.68□□□□□ -0.22
RAB5B-203ENST00000546810 DUSP10Q9Y6W6 482 aa13.68□□□□□ -0.22
RAB5B-203ENST00000546810 MYOFQ9NZM1 2061 aa13.68□□□□□ -0.22
RAB5B-203ENST00000546810 MUC22E2RYF6 1773 aaPredicted RBP13.68□□□□□ -0.22
RAB5B-203ENST00000546810 MYO18BQ8IUG5 2567 aa13.68□□□□□ -0.22
RAB5B-203ENST00000546810 PSTPIP1O43586 416 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 RAMP2O60895 175 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 DLDP09622 509 aaKnown RBP13.67□□□□□ -0.22
RAB5B-203ENST00000546810 TNNT1P13805 278 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 JUPP14923 745 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 GOT1P17174 413 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 GNA12Q03113 381 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 FUT11Q495W5 492 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 TAF1BQ53T94 588 aaPredicted RBP13.67□□□□□ -0.22
RAB5B-203ENST00000546810 TXNRD3NBQ6F5E7 133 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 ADIPOR2Q86V24 386 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 LZTR1Q8N653 840 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 UBE2Q2Q8WVN8 375 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 TTC17Q96AE7 1141 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 FEM1AQ9BSK4 669 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 MAGEH1Q9H213 219 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 PCDH18Q9HCL0 1135 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 ITM2CQ9NQX7 267 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 CWC15Q9P013 229 aaKnown RBP13.67□□□□□ -0.22
RAB5B-203ENST00000546810 DNAI1Q9UI46 699 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 SLC25A13Q9UJS0 675 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 GUCA1BQ9UMX6 200 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 HECTD1Q9ULT8 2610 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 PTPRQQ9UMZ3 2332 aa13.67□□□□□ -0.22
RAB5B-203ENST00000546810 WASH3PC4AMC7 463 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 ERVH48-1M5A8F1 160 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 ZSCAN12O43309 604 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 KRT1P04264 644 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 SRPRAP08240 638 aaKnown RBP13.66□□□□□ -0.22
RAB5B-203ENST00000546810 ERCC2P18074 760 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 MZF1P28698 734 aaPredicted RBP13.66□□□□□ -0.22
RAB5B-203ENST00000546810 SERPINB6P35237 376 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 HNF1BP35680 557 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 CSNK1EP49674 416 aaKnown RBP13.66□□□□□ -0.22
RAB5B-203ENST00000546810 YBEYP58557 167 aaPredicted RBP13.66□□□□□ -0.22
RAB5B-203ENST00000546810 ECT2LQ008S8 904 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 KCNC4Q03721 635 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 POLD3Q15054 466 aaPredicted RBP13.66□□□□□ -0.22
RAB5B-203ENST00000546810 KIF19Q2TAC6 998 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 PARP15Q460N3 678 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 FNDC3BQ53EP0 1204 aaKnown RBP13.66□□□□□ -0.22
RAB5B-203ENST00000546810 TMEM215Q68D42 235 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 SERPINA13PQ6UXR4 307 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 ZNF354CQ86Y25 554 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 CPNE8Q86YQ8 564 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 APCDD1Q8J025 514 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 DCAF4L2Q8NA75 395 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 KDM1BQ8NB78 822 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 C1orf216Q8TAB5 229 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 SNIP1Q8TAD8 396 aaKnown RBP13.66□□□□□ -0.22
RAB5B-203ENST00000546810 FAM71BQ8TC56 605 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 CSPG4P5Q96PW8 444 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 ZNF670Q9BS34 389 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 SPON2Q9BUD6 331 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 CALN1Q9BXU9 219 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 THAP10Q9P2Z0 257 aaPredicted RBP13.66□□□□□ -0.22
RAB5B-203ENST00000546810 ZNF212Q9UDV6 495 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 FTSJ1Q9UET6 329 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 SALL4Q9UJQ4 1053 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 AMFRQ9UKV5 643 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 INTS6Q9UL03 887 aaKnown RBP13.66□□□□□ -0.22
RAB5B-203ENST00000546810 HPCAL4Q9UM19 191 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 NEU3Q9UQ49 428 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 PPP2R2CQ9Y2T4 447 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 HYOU1Q9Y4L1 999 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 SNX11Q9Y5W9 270 aa13.66□□□□□ -0.22
RAB5B-203ENST00000546810 CCDC66A2RUB6 948 aa13.65□□□□□ -0.22
RAB5B-203ENST00000546810 LRRD1A4D1F6 860 aa13.65□□□□□ -0.22
RAB5B-203ENST00000546810 PYCARD-AS1I3L0S3 204 aa13.65□□□□□ -0.22
RAB5B-203ENST00000546810 PCDHGA12O60330 932 aa13.65□□□□□ -0.22
RAB5B-203ENST00000546810 SYNCRIPO60506 623 aaKnown RBP13.65□□□□□ -0.22
RAB5B-203ENST00000546810 PALMO75781 387 aa13.65□□□□□ -0.22
RAB5B-203ENST00000546810 OXTRP30559 389 aa13.65□□□□□ -0.22
RAB5B-203ENST00000546810 CCT8P50990 548 aa13.65□□□□□ -0.22
RAB5B-203ENST00000546810 TPMTP51580 245 aa13.65□□□□□ -0.22
RAB5B-203ENST00000546810 AFF3P51826 1226 aaKnown RBP13.65□□□□□ -0.22
RAB5B-203ENST00000546810 NDST2P52849 883 aa13.65□□□□□ -0.22
RAB5B-203ENST00000546810 CLDN6P56747 220 aa13.65□□□□□ -0.22
RAB5B-203ENST00000546810 GEMIN4P57678 1058 aaKnown RBP13.65□□□□□ -0.22
RAB5B-203ENST00000546810 CXADRP78310 365 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms