RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 BNIP3Q12983 259 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 ESRP1Q6NXG1 681 aaKnown RBP14.85□□□□□ -0.03
HOXC11-202ENST00000546378 TFAP2DQ7Z6R9 452 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 CANT1Q8WVQ1 401 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 ZMAT2Q96NC0 199 aaKnown RBP14.85□□□□□ -0.03
HOXC11-202ENST00000546378 CYP2S1Q96SQ9 504 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 EFCAB1Q9HAE3 211 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 PCDHGC3Q9UN70 934 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 COPG1Q9Y678 874 aaKnown RBP14.85□□□□□ -0.03
HOXC11-202ENST00000546378 BPTFQ12830 3046 aa14.85□□□□□ -0.03
HOXC11-202ENST00000546378 RGSL1A5PLK6 1076 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 MAFO75444 373 aaPredicted RBP14.84□□□□□ -0.03
HOXC11-202ENST00000546378 GSRP00390 522 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 SMIM18P0DKX4 95 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 CDK4P11802 303 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 EDNRBP24530 442 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 NDST2P52849 883 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 GNA12Q03113 381 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 SURF1Q15526 300 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 CCL14Q16627 93 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 MIER2Q8N344 545 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 CBR4Q8N4T8 237 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 DGCR6LQ9BY27 220 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.84□□□□□ -0.03
HOXC11-202ENST00000546378 PIN4Q9Y237 131 aaKnown RBP14.84□□□□□ -0.03
HOXC11-202ENST00000546378 A0A1W2PPW3 197 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 ATG7O95352 703 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 PABPC4LP0CB38 370 aaKnown RBP14.84□□□□□ -0.03
HOXC11-202ENST00000546378 PGAM1P18669 254 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 KPNA1P52294 538 aaPredicted RBP14.84□□□□□ -0.03
HOXC11-202ENST00000546378 MTTPP55157 894 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 FASTKQ14296 549 aaKnown RBP14.84□□□□□ -0.03
HOXC11-202ENST00000546378 MXD4Q14582 209 aaPredicted RBP14.84□□□□□ -0.03
HOXC11-202ENST00000546378 VPS26BQ4G0F5 336 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 DUS1LQ6P1R4 473 aaKnown RBP14.84□□□□□ -0.03
HOXC11-202ENST00000546378 OLFML1Q6UWY5 402 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 C16orf89Q6UX73 402 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 NIPA2Q8N8Q9 360 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 NPLOC4Q8TAT6 608 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 ZFAND2BQ8WV99 257 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 FSD1LQ9BXM9 530 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 CDHR5Q9HBB8 845 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 ERI2A8K979 691 aaKnown RBP14.84□□□□□ -0.03
HOXC11-202ENST00000546378 HDAC3O15379 428 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 GABBR2O75899 941 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 HMBSP08397 361 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 GRK2P25098 689 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 ADSLP30566 484 aaPredicted RBP14.84□□□□□ -0.03
HOXC11-202ENST00000546378 PDK2Q15119 407 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 ZPBP2Q6X784 338 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 ARNTL2Q8WYA1 636 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 PABPC5Q96DU9 382 aaKnown RBP14.84□□□□□ -0.03
HOXC11-202ENST00000546378 RMND5BQ96G75 393 aaPredicted RBP14.84□□□□□ -0.03
HOXC11-202ENST00000546378 ZFP42Q96MM3 310 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 MTG1Q9BT17 334 aaPredicted RBP14.84□□□□□ -0.03
HOXC11-202ENST00000546378 ABCG8Q9H221 673 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 RNF39Q9H2S5 420 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 ZNF180Q9UJW8 692 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 ITGA11Q9UKX5 1188 aa14.84□□□□□ -0.03
HOXC11-202ENST00000546378 DNAJC25-GNG10A0A024R161 153 aa14.83□□□□□ -0.03
HOXC11-202ENST00000546378 ARHGAP10A1A4S6 786 aa14.83□□□□□ -0.03
HOXC11-202ENST00000546378 TNPO2O14787 897 aaKnown RBP14.83□□□□□ -0.03
HOXC11-202ENST00000546378 TADA2AO75478 443 aa14.83□□□□□ -0.03
HOXC11-202ENST00000546378 PFKMP08237 780 aa14.83□□□□□ -0.03
HOXC11-202ENST00000546378 SERPINB8P50452 374 aa14.83□□□□□ -0.03
HOXC11-202ENST00000546378 ADGRE1Q14246 886 aa14.83□□□□□ -0.03
HOXC11-202ENST00000546378 TBCELQ5QJ74 424 aa14.83□□□□□ -0.03
HOXC11-202ENST00000546378 KLHL35Q6PF15 583 aa14.83□□□□□ -0.03
HOXC11-202ENST00000546378 ARCQ7LC44 396 aa14.83□□□□□ -0.03
HOXC11-202ENST00000546378 RAVER1Q8IY67 606 aaKnown RBP14.83□□□□□ -0.03
HOXC11-202ENST00000546378 RIN3Q8TB24 985 aa14.83□□□□□ -0.03
HOXC11-202ENST00000546378 ELMO1Q92556 727 aa14.83□□□□□ -0.03
HOXC11-202ENST00000546378 FICDQ9BVA6 458 aa14.83□□□□□ -0.03
HOXC11-202ENST00000546378 ALG9Q9H6U8 611 aa14.83□□□□□ -0.03
HOXC11-202ENST00000546378 RPL26L1Q9UNX3 145 aaKnown RBP14.83□□□□□ -0.03
HOXC11-202ENST00000546378 DICER1Q9UPY3 1922 aaKnown RBP14.83□□□□□ -0.04
HOXC11-202ENST00000546378 ZNF189O75820 626 aaPredicted RBP14.83□□□□□ -0.04
HOXC11-202ENST00000546378 SIX3O95343 332 aaPredicted RBP14.83□□□□□ -0.04
HOXC11-202ENST00000546378 MYCP01106 439 aaPredicted RBP14.83□□□□□ -0.04
HOXC11-202ENST00000546378 DCTN2Q13561 401 aaKnown RBP14.83□□□□□ -0.04
HOXC11-202ENST00000546378 ZNF789Q5FWF6 425 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 RGMBQ6NW40 437 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 KBTBD6Q86V97 674 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 ARL10Q8N8L6 244 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 BPIFB6Q8NFQ5 453 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 OR6J1Q8NGC5 347 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 PRICKLE1Q96MT3 831 aaPredicted RBP14.83□□□□□ -0.04
HOXC11-202ENST00000546378 KCNA7Q96RP8 456 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 GPAMQ9HCL2 828 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 LTB4R2Q9NPC1 389 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 PFDN4Q9NQP4 134 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 CCNT2O60583 730 aaKnown RBP14.83□□□□□ -0.04
HOXC11-202ENST00000546378 LRPAP1P30533 357 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 CEP97Q8IW35 865 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 EXOC8Q8IYI6 725 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 ZNF513Q8N8E2 541 aaPredicted RBP14.83□□□□□ -0.04
HOXC11-202ENST00000546378 C1orf50Q9BV19 199 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 BRD8Q9H0E9 1235 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 WDR70Q9NW82 654 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 SELENONQ9NZV5 590 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms