RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 LRRC38Q5VT99 294 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 GRAMD4Q6IC98 578 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 FAM72DQ6L9T8 149 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 RWDD4Q6NW29 188 aaKnown RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 OGFOD3Q6PK18 319 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 LRRC31Q6UY01 552 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 ANKS1BQ7Z6G8 1248 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 TFAP2DQ7Z6R9 452 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 FAM72BQ86X60 149 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 CCDC117Q8IWD4 279 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 SUGP1Q8IWZ8 645 aaKnown RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 RHOT1Q8IXI2 618 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 SYCE1Q8N0S2 351 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 CCAR2Q8N163 923 aaKnown RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 CFAP52Q8N1V2 620 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 RNF10Q8N5U6 811 aaKnown RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 ZNF557Q8N988 423 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 TERB1Q8NA31 727 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 WFDC5Q8TCV5 224 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 EDAQ92838 391 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 IGSF8Q969P0 613 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 EXOC4Q96A65 974 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 TMA16Q96EY4 203 aaKnown RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 SHDQ96IW2 340 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 C1orf74Q96LT6 269 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 XPO6Q96QU8 1125 aaKnown RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 P2RY13Q9BPV8 354 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 ZNF670Q9BS34 389 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 ZYG11BQ9C0D3 744 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 TBC1D17Q9HA65 648 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 PCDH18Q9HCL0 1135 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 ARHGEF4Q9NR80 690 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 RCOR3Q9P2K3 495 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 DEC1Q9P2X7 70 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 PPARGC1AQ9UBK2 798 aaKnown RBP6.5□□□□□ -1.37
PRKDC-211ENST00000546304 OR12D3Q9UGF7 316 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 CYP8B1Q9UNU6 501 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 ALG6Q9Y672 507 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 AK5Q9Y6K8 562 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 CACNA1IQ9P0X4 2223 aa6.5□□□□□ -1.37
PRKDC-211ENST00000546304 ANKRD36A6QL64 1941 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 LRRD1A4D1F6 860 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 GOLGA6L9A6NEM1 432 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 SHISA7A6NL88 538 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 H0Y626 953 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 MAN2B1O00754 1011 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 SRGAP2O75044 1071 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 CLDN11O75508 207 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 CNTN5O94779 1100 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 KAT7O95251 611 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 FTCDO95954 541 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 PRNPP04156 253 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 RHOCP08134 193 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 CD48P09326 243 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 PABPC1P11940 636 aaKnown RBP6.49□□□□□ -1.37
PRKDC-211ENST00000546304 TNNT1P13805 278 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 GOT1P17174 413 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 HLA-FP30511 346 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 CTNNA1P35221 906 aaKnown RBP6.49□□□□□ -1.37
PRKDC-211ENST00000546304 ARL4AP40617 200 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 MAPKAPK2P49137 400 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 CDH4P55283 916 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 CDH6P55285 790 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 STARD6P59095 220 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 MESP2Q0VG99 397 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 DPYSQ14117 519 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 DPYSL3Q14195 570 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 PON2Q15165 354 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 FUT11Q495W5 492 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 PREPLQ4J6C6 727 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-211ENST00000546304 TMEM196Q5HYL7 178 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 ZFYVE27Q5T4F4 411 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 CWF19L1Q69YN2 538 aaKnown RBP6.49□□□□□ -1.37
PRKDC-211ENST00000546304 CXorf57Q6NSI4 855 aaKnown RBP6.49□□□□□ -1.37
PRKDC-211ENST00000546304 ZNF852Q6ZMS4 543 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 RFX8Q6ZV50 586 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 ZNF765Q7L2R6 523 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 PEX26Q7Z412 305 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 NLRP14Q86W24 1093 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 AHI1Q8N157 1196 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 CARNMT1Q8N4J0 409 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.49□□□□□ -1.37
PRKDC-211ENST00000546304 NAT16Q8N8M0 369 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 RTL3Q8N8U3 475 aaKnown RBP6.49□□□□□ -1.37
PRKDC-211ENST00000546304 TRIM58Q8NG06 486 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 PJA1Q8NG27 643 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 KIAA1524Q8TCG1 905 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 GRIN3AQ8TCU5 1115 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 WFIKKN2Q8TEU8 576 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 FAM3CQ92520 227 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 KRT35Q92764 455 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 CD101Q93033 1021 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 CSPG4P5Q96PW8 444 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 CALN1Q9BXU9 219 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 SLC2A11Q9BYW1 496 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 MAGEB5Q9BZ81 275 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 FOXQ1Q9C009 403 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 MFSD1Q9H3U5 465 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 CATSPERBQ9H7T0 1116 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 LTB4R2Q9NPC1 389 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms