RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 FAM72CH0Y354 149 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 PCDH8O95206 1070 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 F9P00740 461 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 IGFALSP35858 605 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 PCBP4P57723 403 aaKnown RBP12.78□□□□□ -0.36
COPS7A-221ENST00000546229 ERVPABLB-1P60509 514 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 HNRNPKP61978 463 aaKnown RBP eCLIP12.78□□□□□ -0.36
COPS7A-221ENST00000546229 GABREP78334 506 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 DAB2P98082 770 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 PTP4A2Q12974 167 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 CAMK4Q16566 473 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 DPCR1Q3MIW9 517 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 CARD16Q5EG05 197 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 FAM72AQ5TYM5 149 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 FAM72DQ6L9T8 149 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 ZCCHC8Q6NZY4 707 aaKnown RBP12.78□□□□□ -0.36
COPS7A-221ENST00000546229 GPR155Q7Z3F1 870 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 FAM72BQ86X60 149 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 DCP2Q8IU60 420 aaKnown RBP12.78□□□□□ -0.36
COPS7A-221ENST00000546229 EMC1Q8N766 993 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 ZNF248Q8NDW4 579 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 DENND6BQ8NEG7 585 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 IFI44Q8TCB0 444 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 ARHGEF2Q92974 986 aaKnown RBP12.78□□□□□ -0.36
COPS7A-221ENST00000546229 CENPTQ96BT3 561 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 PPP1R16AQ96I34 528 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 DEPDC7Q96QD5 511 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 BOCQ9BWV1 1114 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 GANQ9H2C0 597 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 TCEAL2Q9H3H9 227 aaPredicted RBP12.78□□□□□ -0.36
COPS7A-221ENST00000546229 NOL6Q9H6R4 1146 aaKnown RBP12.78□□□□□ -0.36
COPS7A-221ENST00000546229 SYNCQ9H7C4 482 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 POLR1BQ9H9Y6 1135 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 ATP13A1Q9HD20 1204 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 DNAJC28Q9NX36 388 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
COPS7A-221ENST00000546229 SPENQ96T58 3664 aaKnown RBP12.78□□□□□ -0.36
COPS7A-221ENST00000546229 SCN8AQ9UQD0 1980 aa12.78□□□□□ -0.36
COPS7A-221ENST00000546229 PIEZO2Q9H5I5 2752 aa12.77□□□□□ -0.36
COPS7A-221ENST00000546229 IGLON5A6NGN9 336 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 USP12O75317 370 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 PAK4O96013 591 aaPredicted RBP12.77□□□□□ -0.37
COPS7A-221ENST00000546229 CYP1A1P04798 512 aaPredicted RBP12.77□□□□□ -0.37
COPS7A-221ENST00000546229 MMEP08473 750 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 UCHL3P15374 230 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 CHRNB2P17787 502 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 MTIF2P46199 727 aaKnown RBP12.77□□□□□ -0.37
COPS7A-221ENST00000546229 RABIFP47224 123 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 SNX16P57768 344 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 SLC20A2Q08357 652 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 C19orf57Q0VDD7 668 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 ISXQ2M1V0 245 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 VWA3BQ502W6 1294 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 PERM1Q5SV97 790 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 TAF3Q5VWG9 929 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 RETSATQ6NUM9 610 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 LRRC31Q6UY01 552 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 ZSCAN30Q86W11 494 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 DRC7Q8IY82 874 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 RBFAQ8N0V3 343 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 MLKLQ8NB16 471 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 OR6K2Q8NGY2 324 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 SLC20A1Q8WUM9 679 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 TTC9Q92623 222 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 CENPIQ92674 756 aaPredicted RBP12.77□□□□□ -0.37
COPS7A-221ENST00000546229 TBATAQ96M53 351 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 LRRC61Q9BV99 259 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 DUSP23Q9BVJ7 150 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 TM6SF2Q9BZW4 377 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 SEMA4CQ9C0C4 833 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 DYRK4Q9NR20 520 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 METTL5Q9NRN9 209 aaKnown RBP12.77□□□□□ -0.37
COPS7A-221ENST00000546229 TMEM51Q9NW97 253 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 TMEM248Q9NWD8 314 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 PAXBP1Q9Y5B6 917 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 ENTPD2Q9Y5L3 495 aa12.77□□□□□ -0.37
COPS7A-221ENST00000546229 EME2A4GXA9 379 aaPredicted RBP12.76□□□□□ -0.37
COPS7A-221ENST00000546229 C2CD4BA6NLJ0 364 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 C16orf96A6NNT2 1141 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 CDRT15L2A8MXV6 281 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 GOLGA8SH3BPF8 625 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 ERVH48-1M5A8F1 160 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 AQP9O43315 295 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 SRGAP2O75044 1071 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 GCATO75600 419 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 GSRP00390 522 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 ALPPL2P10696 532 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 MMP8P22894 467 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 HDAC4P56524 1084 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 GSCP56915 257 aaPredicted RBP12.76□□□□□ -0.37
COPS7A-221ENST00000546229 BPIFB4P59827 614 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 CXADRP78310 365 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 FMO1Q01740 532 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 CCDC15Q0P6D6 951 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 MAPK8IP2Q13387 824 aaPredicted RBP12.76□□□□□ -0.37
COPS7A-221ENST00000546229 C15orf59Q2T9L4 293 aaPredicted RBP12.76□□□□□ -0.37
COPS7A-221ENST00000546229 CCDC14Q49A88 953 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 NAA35Q5VZE5 725 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 SLC35F3Q8IY50 421 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 TP53I13Q8NBR0 393 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms