RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	MAGEC1	O60732	1142 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	TMCC1	O94876	653 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	DKK1	O94907	266 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	CYP1A2	P05177	515 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	FAM228B	P0C875	321 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	TRIM14	Q14142	442 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	PIGH	Q14442	188 aa	Predicted RBP	13.62	□□□□□ -0.23
POLE-222	ENST00000545015	DPYSL2	Q16555	572 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	ZNF284	Q2VY69	593 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	MYLK3	Q32MK0	819 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	BOLA3	Q53S33	107 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	ZNF805	Q5CZA5	627 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	KIAA1161	Q6NSJ0	714 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	ALKBH5	Q6P6C2	394 aa	Known RBP	13.62	□□□□□ -0.23
POLE-222	ENST00000545015	RFX8	Q6ZV50	586 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	OXR1	Q8N573	874 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	GRIN3A	Q8TCU5	1115 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	CAMK1G	Q96NX5	476 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	KCTD15	Q96SI1	283 aa	Predicted RBP	13.62	□□□□□ -0.23
POLE-222	ENST00000545015	CDC6	Q99741	560 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	TM6SF2	Q9BZW4	377 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	DHX35	Q9H5Z1	703 aa	Known RBP	13.62	□□□□□ -0.23
POLE-222	ENST00000545015	GDF3	Q9NR23	364 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	FADS3	Q9Y5Q0	445 aa		13.62	□□□□□ -0.23
POLE-222	ENST00000545015	PLXNA2	O75051	1894 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015		A0A1W2PQU0	124 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	PRAMEF11	O60813	436 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	ERCC2	P18074	760 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	CASP14	P31944	242 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	GRK6	P43250	576 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	DNA2	P51530	1060 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	SHB	Q15464	509 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	SPECC1L	Q69YQ0	1117 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	PARS2	Q7L3T8	475 aa	Known RBP	13.61	□□□□□ -0.23
POLE-222	ENST00000545015	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.61	□□□□□ -0.23
POLE-222	ENST00000545015	LZTR1	Q8N653	840 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	HCAR2	Q8TDS4	363 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	CPLX3	Q8WVH0	158 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	TEKT4	Q8WW24	435 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	ASB12	Q8WXK4	309 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	GDAP1L1	Q96MZ0	367 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	CNTNAP3B	Q96NU0	1288 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	DNAJC7	Q99615	494 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
POLE-222	ENST00000545015	CNTNAP3	Q9BZ76	1288 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	CPEB1	Q9BZB8	566 aa	Known RBP	13.61	□□□□□ -0.23
POLE-222	ENST00000545015	THAP2	Q9H0W7	228 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	ZDHHC6	Q9H6R6	413 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	GPATCH2L	Q9NWQ4	482 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	MYO1A	Q9UBC5	1043 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	DKK3	Q9UBP4	350 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	PCSK1N	Q9UHG2	260 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	ZFR2	Q9UPR6	939 aa	Known RBP	13.61	□□□□□ -0.23
POLE-222	ENST00000545015	PCDHB9	Q9Y5E1	797 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	CABIN1	Q9Y6J0	2220 aa		13.61	□□□□□ -0.23
POLE-222	ENST00000545015	SSU72P8	A0A1W2PR75	194 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	ARHGAP42	A6NI28	874 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	C16orf96	A6NNT2	1141 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	AREL1	O15033	823 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	TSPAN6	O43657	245 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	IGSF6	O95976	241 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	HNRNPA2B1	P22626	353 aa	Known RBP	13.6	□□□□□ -0.23
POLE-222	ENST00000545015	IL1R2	P27930	398 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	MAT2A	P31153	395 aa	Known RBP	13.6	□□□□□ -0.23
POLE-222	ENST00000545015	CSNK1D	P48730	415 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	SUOX	P51687	545 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	RPS21	P63220	83 aa	Known RBP	13.6	□□□□□ -0.23
POLE-222	ENST00000545015	RAD51	Q06609	339 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.6	□□□□□ -0.23
POLE-222	ENST00000545015	DPYS	Q14117	519 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	STAT4	Q14765	748 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	GRM3	Q14832	879 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	CYTH1	Q15438	398 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	ASTE1	Q2TB18	679 aa	Predicted RBP	13.6	□□□□□ -0.23
POLE-222	ENST00000545015	INAVA	Q3KP66	663 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	FBXL19	Q6PCT2	694 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	SPATS2	Q86XZ4	545 aa	Known RBP	13.6	□□□□□ -0.23
POLE-222	ENST00000545015	ARHGAP12	Q8IWW6	846 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	SAP25	Q8TEE9	199 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	ADAMTS14	Q8WXS8	1223 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	ARHGEF26	Q96DR7	871 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	FEM1C	Q96JP0	617 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	LENG8	Q96PV6	779 aa	Predicted RBP	13.6	□□□□□ -0.23
POLE-222	ENST00000545015	C1QTNF2	Q9BXJ5	285 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.6	□□□□□ -0.23
POLE-222	ENST00000545015	SLC39A8	Q9C0K1	460 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	TSPY26P	Q9H489	355 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	GPR27	Q9NS67	375 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	CWC15	Q9P013	229 aa	Known RBP	13.6	□□□□□ -0.23
POLE-222	ENST00000545015	LHX3	Q9UBR4	397 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	UBA2	Q9UBT2	640 aa	Predicted RBP	13.6	□□□□□ -0.23
POLE-222	ENST00000545015	IP6K2	Q9UHH9	426 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	NEUROG3	Q9Y4Z2	214 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	HS3ST3A1	Q9Y663	406 aa		13.6	□□□□□ -0.23
POLE-222	ENST00000545015	TSPAN11	A1L157	253 aa		13.59	□□□□□ -0.23
POLE-222	ENST00000545015	KRIT1	O00522	736 aa		13.59	□□□□□ -0.23
POLE-222	ENST00000545015	KCNK3	O14649	394 aa		13.59	□□□□□ -0.23
POLE-222	ENST00000545015	SPINT1	O43278	529 aa		13.59	□□□□□ -0.23
POLE-222	ENST00000545015	FTH1P19	P0C7X4	201 aa		13.59	□□□□□ -0.23
POLE-222	ENST00000545015	EPHA8	P29322	1005 aa	Predicted RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms