RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 CTTNBP2NLQ9P2B4 639 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 RCOR3Q9P2K3 495 aaPredicted RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 MYO1AQ9UBC5 1043 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 HECAQ9UBI9 543 aaPredicted RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 UBA2Q9UBT2 640 aaPredicted RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 IPO11Q9UI26 975 aaKnown RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 DNAI1Q9UI46 699 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 HCN2Q9UL51 889 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ANKRD6Q9Y2G4 727 aa5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 ATXN2Q99700 1313 aaKnown RBP5.71□□□□□ -1.5
CLSTN3-215ENST00000544584 PTPN13Q12923 2485 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 A0A0D9SEW6 157 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 TMEM110-MUSTN1A8MSY1 372 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 RASA4BC9J798 803 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 AKR1B15C9JRZ8 316 aaPredicted RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 H3BM21 787 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 KRIT1O00522 736 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 RASA4O43374 803 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 AP1G1O43747 822 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 PCDHGA12O60330 932 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 LEFTY1O75610 366 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 PALMO75781 387 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 ZNF189O75820 626 aaPredicted RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 CAPNS1P04632 268 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 ITGAVP06756 1048 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 SKILP12757 684 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 ZFXP17010 805 aaPredicted RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 TFE3P19532 575 aaPredicted RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 SPINK2P20155 84 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 HNRNPA2B1P22626 353 aaKnown RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 MAOBP27338 520 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 SERPINA4P29622 427 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 HNRNPH3P31942 346 aaKnown RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 CASP14P31944 242 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 CYLC1P35663 651 aaPredicted RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 CETN2P41208 172 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 SLC1A1P43005 524 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 CSNK1EP49674 416 aaKnown RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 STK19P49842 368 aaPredicted RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 RPL7AP62424 266 aaKnown RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 NSUN2Q08J23 767 aaKnown RBP eCLIP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 PTP4A2Q12974 167 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 GRIK2Q13002 908 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 SERINC3Q13530 473 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 PEX6Q13608 980 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 ZNF235Q14590 738 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 PDK2Q15119 407 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 SLC18A3Q16572 532 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 HLA-BQ31612 363 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 MYLK3Q32MK0 819 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 ZNF805Q5CZA5 627 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 ARSIQ5FYB1 569 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 PPP6R3Q5H9R7 873 aaPredicted RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 RALGPS1Q5JS13 557 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 MANEALQ5VSG8 457 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 TCEAL6Q6IPX3 200 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 TIGD7Q6NT04 549 aaPredicted RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 PSAPL1Q6NUJ1 521 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 BRAT1Q6PJG6 821 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 RFX8Q6ZV50 586 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 PHLDB2Q86SQ0 1253 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 TTC7BQ86TV6 843 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 NLRP14Q86W24 1093 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 HORMAD1Q86X24 394 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 PROSER1Q86XN7 944 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 ZNF683Q8IZ20 524 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 CCDC185Q8N715 623 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 NIPA2Q8N8Q9 360 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 MFSD2AQ8NA29 543 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 KCTD6Q8NC69 237 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 OR2A12Q8NGT7 310 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 JOSD2Q8TAC2 188 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 GRIN3AQ8TCU5 1115 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 CXorf40AQ8TE69 158 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 RHBDD1Q8TEB9 315 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 SETD7Q8WTS6 366 aaKnown RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 SCG3Q8WXD2 468 aaKnown RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 ARHGEF2Q92974 986 aaKnown RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 GLMNQ92990 594 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 TCEAL3Q969E4 200 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 ALG14Q96F25 216 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 IFT43Q96FT9 208 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 KLHDC7BQ96G42 594 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 MYO19Q96H55 970 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 ZNF641Q96N77 438 aaPredicted RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 DNAJC7Q99615 494 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 NUP85Q9BW27 656 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 CINPQ9BW66 212 aaPredicted RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 SCNM1Q9BWG6 230 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 CPEB1Q9BZB8 566 aaKnown RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 XPO4Q9C0E2 1151 aaKnown RBP5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 TTYH3Q9C0H2 523 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 SLC6A17Q9H1V8 727 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 SMOC1Q9H4F8 434 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 ZDHHC6Q9H6R6 413 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 SP110Q9HB58 689 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 TM9SF3Q9HD45 589 aa5.7□□□□□ -1.5
CLSTN3-215ENST00000544584 TM7SF3Q9NS93 570 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms