RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 C9orf50Q5SZB4 431 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 STXBP5Q5T5C0 1151 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 IL31Q6EBC2 164 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 C6orf89Q6UWU4 347 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 HTR3DQ70Z44 454 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 KCNMB4Q86W47 210 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 CPXM2Q8N436 756 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 OR7D4Q8NG98 312 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 ISL2Q96A47 359 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 MGME1Q9BQP7 344 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 MCMBPQ9BTE3 642 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 TRPC7Q9HCX4 862 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 TREX1Q9NSU2 369 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 SMPD4Q9NXE4 827 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 PLLPQ9Y342 182 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 PSAT1Q9Y617 370 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 CPQQ9Y646 472 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 ATXN2Q99700 1313 aaKnown RBP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 MTCL1Q9Y4B5 1905 aaKnown RBP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 HEATR9A2RTY3 570 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 SOBPA7XYQ1 873 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 SNX3O60493 162 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 SIN3BO75182 1162 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 PAPSS2O95340 614 aaPredicted RBP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 RB1P06400 928 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 PAMP19021 973 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 HADHAP40939 763 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 SERPINH1P50454 418 aaKnown RBP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 SGSHP51688 502 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 LIMK2P53671 638 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 EPHA5P54756 1037 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 MAXP61244 160 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 ZXDBP98169 803 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 LAMB3Q13751 1172 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 BMPR2Q13873 1038 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 IHHQ14623 411 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 ITIH4Q14624 930 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 MPP7Q5T2T1 576 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 CXorf57Q6NSI4 855 aaKnown RBP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 YTHDF3Q7Z739 585 aaKnown RBP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 CNTN4Q8IWV2 1026 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 HS6ST3Q8IZP7 471 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 HJURPQ8NCD3 748 aaPredicted RBP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 TMA16Q96EY4 203 aaKnown RBP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 FEM1CQ96JP0 617 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 GCNAQ96QF7 691 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 SRPK1Q96SB4 655 aaKnown RBP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 RBBP8Q99708 897 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 SEMA3CQ99985 751 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 PAIP2Q9BPZ3 127 aaKnown RBP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 ALG13Q9NP73 1137 aaKnown RBP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 TLR9Q9NR96 1032 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 C20orf96Q9NUD7 363 aaPredicted RBP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 SLC17A7Q9P2U7 560 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 UBA2Q9UBT2 640 aaPredicted RBP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 LSM7Q9UK45 103 aaKnown RBP12.91□□□□□ -0.34
PAAF1-214ENST00000544552 GRID1Q9ULK0 1009 aa12.91□□□□□ -0.34
PAAF1-214ENST00000544552 TRAV19A0A0A6YYK7 116 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 TYW5A2RUC4 315 aaKnown RBP12.9□□□□□ -0.34
PAAF1-214ENST00000544552 LCHNA4D1U4 455 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 ALDOAP04075 364 aaKnown RBP12.9□□□□□ -0.34
PAAF1-214ENST00000544552 HLA-DPA1P20036 260 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 HOXA9P31269 272 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 MAGEA12P43365 314 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 ARCN1P48444 511 aaKnown RBP12.9□□□□□ -0.34
PAAF1-214ENST00000544552 CLCN4P51793 760 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 POU6F1Q14863 301 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 INSCQ1MX18 579 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 HSP90AA5PQ58FG0 334 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 PPM1LQ5SGD2 360 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 KIAA0930Q6ICG6 404 aaPredicted RBP12.9□□□□□ -0.34
PAAF1-214ENST00000544552 NLRP9Q7RTR0 991 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 STRA8Q7Z7C7 330 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 NDUFAF2Q8N183 169 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 ANKS4BQ8N8V4 417 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 CCDC197Q8NCU1 140 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 LRRC8CQ8TDW0 803 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 POF1BQ8WVV4 589 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 PEX13Q92968 403 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 CABS1Q96KC9 395 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 ZNF778Q96MU6 729 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 SPON2Q9BUD6 331 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 IQCGQ9H095 443 aaKnown RBP12.9□□□□□ -0.34
PAAF1-214ENST00000544552 ASAH2Q9NR71 780 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 FGFR1OP2Q9NVK5 253 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 DCDC2Q9UHG0 476 aa12.9□□□□□ -0.34
PAAF1-214ENST00000544552 LINC01553A4QN01 128 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 HIDE1A8MVS5 230 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 MUSKO15146 869 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 TIMM44O43615 452 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 TSPAN3O60637 253 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 SERPINF2P08697 491 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 CR2P20023 1033 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 DDX6P26196 483 aaKnown RBP eCLIP12.89□□□□□ -0.35
PAAF1-214ENST00000544552 CHRNA4P43681 627 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 POLD2P49005 469 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 CYP4F8P98187 520 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 PDE1BQ01064 536 aa12.89□□□□□ -0.35
PAAF1-214ENST00000544552 PCSK7Q16549 785 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms