RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 CAGE1Q8TC20 777 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 UBE2Q2Q8WVN8 375 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 SLC9A6Q92581 669 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 SAAL1Q96ER3 474 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 TIMP4Q99727 224 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 EFHD1Q9BUP0 239 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 ZNF304Q9HCX3 659 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 ANKEF1Q9NU02 776 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 PACSIN3Q9UKS6 424 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 MKLN1Q9UL63 735 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 ICKQ9UPZ9 632 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 DHDHQ9UQ10 334 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 DEPDC5O75140 1603 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 PLA2R1Q13018 1463 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 MYO5BQ9ULV0 1848 aa3.97□□□□□ -1.77
SCFD1-207ENST00000544052 VWDEQ8N2E2 1590 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 RTEL1-TNFRSF6BF6WH68 1400 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 CYP2D7A0A087X1C5 515 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 A0A0A0MQY5 61 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 KCNJ18B7U540 433 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 UBE2Q2LH0YL09 131 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 SEC31AO94979 1220 aaKnown RBP3.96□□□□□ -1.77
SCFD1-207ENST00000544052 SGPL1O95470 568 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 NFATC1O95644 943 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 ALOX12P18054 663 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 MCM7P33993 719 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 CACNA2D1P54289 1103 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 RPE65Q16518 533 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 C10orf76Q5T2E6 689 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 PRAMEF17Q5VTA0 474 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 FAM171A1Q5VUB5 890 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 AADACL2Q6P093 401 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 RRM2BQ7LG56 351 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 GPR150Q8NGU9 434 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 ZFPM2Q8WW38 1151 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 UROC1Q96N76 676 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 WDFY2Q96P53 400 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.96□□□□□ -1.77
SCFD1-207ENST00000544052 CCDC68Q9H2F9 335 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 MUC13Q9H3R2 512 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 SNTG1Q9NSN8 517 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 C20orf141Q9NUB4 165 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 BABAM1Q9NWV8 329 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 CFDP1Q9UEE9 299 aaPredicted RBP3.96□□□□□ -1.77
SCFD1-207ENST00000544052 TNFSF13BQ9Y275 285 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 KCNE2Q9Y6J6 123 aa3.96□□□□□ -1.77
SCFD1-207ENST00000544052 ABCC3O15438 1527 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 SPATA31D1Q6ZQQ2 1576 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 PTGES3LE9PB15 166 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 MSI1O43347 362 aaKnown RBP3.96□□□□□ -1.78
SCFD1-207ENST00000544052 AKAP8O43823 692 aaKnown RBP3.96□□□□□ -1.78
SCFD1-207ENST00000544052 HLA-DQA2P01906 255 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 PORP16435 677 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-207ENST00000544052 TACR3P29371 465 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 FMO4P31512 558 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 CLK3P49761 638 aaKnown RBP3.96□□□□□ -1.78
SCFD1-207ENST00000544052 RARSP54136 660 aaKnown RBP3.96□□□□□ -1.78
SCFD1-207ENST00000544052 RPL7AP62424 266 aaKnown RBP3.96□□□□□ -1.78
SCFD1-207ENST00000544052 C5orf22Q49AR2 442 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 KIAA1755Q5JYT7 1200 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 TTI2Q6NXR4 508 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 BRINP3Q76B58 766 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 PRSS45Q7RTY3 260 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 FAM160B2Q86V87 743 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 CADM4Q8NFZ8 388 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 IFT27Q9BW83 186 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 SCPEP1Q9HB40 452 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 ATP8A2Q9NTI2 1148 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 HCFC1R1Q9NWW0 138 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 NSMCE4AQ9NXX6 385 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 SLC17A6Q9P2U8 582 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 CTNNAL1Q9UBT7 734 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 LIMA1Q9UHB6 759 aaKnown RBP3.96□□□□□ -1.78
SCFD1-207ENST00000544052 ZNF215Q9UL58 517 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-207ENST00000544052 PCDHGB4Q9UN71 923 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 A2ML1A8K2U0 1454 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 PZPP20742 1482 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 MAP3K1Q13233 1512 aa3.96□□□□□ -1.78
SCFD1-207ENST00000544052 DHX29Q7Z478 1369 aaKnown RBP3.95□□□□□ -1.78
SCFD1-207ENST00000544052 PTPN23Q9H3S7 1636 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 IQGAP1P46940 1657 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 hCG_1807616A0A1W2PRN6 198 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 GTPBP1O00178 669 aaKnown RBP3.95□□□□□ -1.78
SCFD1-207ENST00000544052 MATN3O15232 486 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 ZNF500O60304 480 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-207ENST00000544052 TMCC2O75069 709 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 DDAH2O95865 285 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 PLAUP00749 431 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 SERPINC1P01008 464 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 WT1P19544 449 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-207ENST00000544052 RPS6KB1P23443 525 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 PSMA4P25789 261 aaKnown RBP3.95□□□□□ -1.78
SCFD1-207ENST00000544052 ACSL1P33121 698 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 SKIV2L2P42285 1042 aaKnown RBP3.95□□□□□ -1.78
SCFD1-207ENST00000544052 NLRP5P59047 1200 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 MC1RQ01726 317 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 CYP4A11Q02928 519 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 CREB5Q02930 508 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 ABHD18Q0P651 414 aa3.95□□□□□ -1.78
SCFD1-207ENST00000544052 CUL4AQ13619 759 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms