RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 APC2O95996 2303 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 RASA4BC9J798 803 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PRAMEF26H0Y7S4 382 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SLC31A1O15431 190 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SPINT1O43278 529 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 RASA4O43374 803 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CREB3O43889 395 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ADRB3P13945 408 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PSMA2P25787 234 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 GRK6P43250 576 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 RECQLP46063 649 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 DNA2P51530 1060 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 GEMIN4P57678 1058 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 YBEYP58557 167 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 KLHL30Q0D2K2 578 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CCDC15Q0P6D6 951 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 OVGP1Q12889 678 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SERINC3Q13530 473 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 FGL2Q14314 439 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 MYLK3Q32MK0 819 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PARS2Q7L3T8 475 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 GATAD2AQ86YP4 633 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 NETO2Q8NC67 525 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 OR6K2Q8NGY2 324 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SYN2Q92777 582 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 KLK6Q92876 244 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 LRIG1Q96JA1 1093 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TM6SF2Q9BZW4 377 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 GDF3Q9NR23 364 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CNOT8Q9UFF9 292 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 FADS3Q9Y5Q0 445 aa13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 COL5A1P20908 1838 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ZSCAN5CA6NGD5 496 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 C16orf96A6NNT2 1141 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 FGF10O15520 208 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 AP1G1O43747 822 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 LRCH4O75427 683 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 KRT37O76014 449 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TMCC1O94876 653 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PRLRP16471 622 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 EPHA8P29322 1005 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 MIPP30301 263 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 HTR7P34969 479 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 NEK3P51956 506 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 UBASH3AP57075 661 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 BNIP3Q12983 259 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 STAT4Q14765 748 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CYTH1Q15438 398 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ZSCAN23Q3MJ62 389 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PARP15Q460N3 678 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 INO80DQ53TQ3 878 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ATXN7L2Q5T6C5 722 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ERMARDQ5T6L9 678 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 AFMIDQ63HM1 303 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 OR2AP1Q8NGE2 309 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PPP1R16AQ96I34 528 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 KCTD15Q96SI1 283 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ZDHHC6Q9H6R6 413 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CATSPERBQ9H7T0 1116 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CAAP1Q9H8G2 361 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PDFQ9HBH1 243 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 DYRK4Q9NR20 520 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 GPR27Q9NS67 375 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 HPCAL4Q9UM19 191 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CAPN11Q9UMQ6 739 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 AP4E1Q9UPM8 1137 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 MFHAS1Q9Y4C4 1052 aa13.32□□□□□ -0.28
TNFRSF1A-215ENST00000543359 EIF3CLB5ME19 914 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 AREL1O15033 823 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 TNFSF14O43557 240 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 BUB1O43683 1085 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 POP4O95707 220 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 IL1R2P27930 398 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ABL2P42684 1182 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SNRPD1P62314 119 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SLC45A4Q5BKX6 768 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ZNF805Q5CZA5 627 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CCNI2Q6ZMN8 369 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 GCNT7Q6ZNI0 430 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ABI3BPQ7Z7G0 1075 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ARHGAP12Q8IWW6 846 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SLC22A18ASQ8N1D0 253 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 CASKIN2Q8WXE0 1202 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ZNF653Q96CK0 615 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 BMFQ96LC9 184 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 KLF6Q99612 283 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 EIF3CQ99613 913 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SNRNP25Q9BV90 132 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 C1QTNF2Q9BXJ5 285 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 SLC17A9Q9BYT1 436 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 FZD3Q9NPG1 666 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 LHX3Q9UBR4 397 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 PCSK1NQ9UHG2 260 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 GGT7Q9UJ14 662 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 NENFQ9UMX5 172 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 APOBEC2Q9Y235 224 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 HS3ST3A1Q9Y663 406 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 ACACAQ13085 2346 aa13.31□□□□□ -0.28
TNFRSF1A-215ENST00000543359 J3KR12 359 aa13.3□□□□□ -0.28
TNFRSF1A-215ENST00000543359 KRIT1O00522 736 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms