RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 DSC2Q02487 901 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 TEAD2Q15562 447 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 CERCAMQ5T4B2 595 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 RNF219Q5W0B1 726 aaPredicted RBP9.46□□□□□ -0.9
GNE-206ENST00000543356 POTEHQ6S545 545 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 BBS7Q8IWZ6 715 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 CMTM8Q8IZV2 173 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 PPM1NQ8N819 430 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.46□□□□□ -0.9
GNE-206ENST00000543356 CDKL2Q92772 493 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 MRRFQ96E11 262 aaKnown RBP9.46□□□□□ -0.9
GNE-206ENST00000543356 TMA16Q96EY4 203 aaKnown RBP9.46□□□□□ -0.9
GNE-206ENST00000543356 KIFC1Q9BW19 673 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 PRKD2Q9BZL6 878 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 SMG5Q9UPR3 1016 aaKnown RBP9.46□□□□□ -0.9
GNE-206ENST00000543356 FAM169AQ9Y6X4 670 aa9.46□□□□□ -0.9
GNE-206ENST00000543356 MIA3Q5JRA6 1907 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 H0Y626 953 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 PMPCBO75439 489 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 TCF3P15923 654 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 CREB1P16220 341 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 CNTFP26441 200 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 SERPINB9P50453 376 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 MAXP61244 160 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 ITKQ08881 620 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 MGAT5Q09328 741 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 ANKRD20A4Q4UJ75 823 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 MPPE1Q53F39 396 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 PCID2Q5JVF3 399 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 CTAGE3PQ8IX95 158 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 CARNMT1Q8N4J0 409 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.45□□□□□ -0.9
GNE-206ENST00000543356 TDRD5Q8NAT2 981 aaKnown RBP9.45□□□□□ -0.9
GNE-206ENST00000543356 MDM1Q8TC05 714 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 ATXN2LQ8WWM7 1075 aaKnown RBP9.45□□□□□ -0.9
GNE-206ENST00000543356 N4BP2L2Q92802 583 aaPredicted RBP9.45□□□□□ -0.9
GNE-206ENST00000543356 ZNF669Q96BR6 464 aaPredicted RBP9.45□□□□□ -0.9
GNE-206ENST00000543356 MTBPQ96DY7 904 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 TCEAL4Q96EI5 215 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 CERS2Q96G23 380 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 PSKH2Q96QS6 385 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 SMC6Q96SB8 1091 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 SPON2Q9BUD6 331 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 CINPQ9BW66 212 aaPredicted RBP9.45□□□□□ -0.9
GNE-206ENST00000543356 MUC3BQ9H195 1237 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 OR51B4Q9Y5P0 310 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 HCFC2Q9Y5Z7 792 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 NUP210Q8TEM1 1887 aaPredicted RBP9.45□□□□□ -0.9
GNE-206ENST00000543356 ZCWPW2A0A1B0GU75 182 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 FOXO6A8MYZ6 492 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 PIAS1O75925 651 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 KRT37O76014 449 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 AVPR1AP37288 418 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 SLC5A9Q2M3M2 681 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 LGSNQ5TDP6 509 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 PPHLN1Q8NEY8 458 aaKnown RBP9.45□□□□□ -0.9
GNE-206ENST00000543356 SH3RF2Q8TEC5 729 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 ALKBH8Q96BT7 664 aaKnown RBP9.45□□□□□ -0.9
GNE-206ENST00000543356 ZNF707Q96C28 371 aaPredicted RBP9.45□□□□□ -0.9
GNE-206ENST00000543356 FCRL3Q96P31 734 aaPredicted RBP9.45□□□□□ -0.9
GNE-206ENST00000543356 RANBP9Q96S59 729 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 CCDC134Q9H6E4 229 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 INTS9Q9NV88 658 aaKnown RBP9.45□□□□□ -0.9
GNE-206ENST00000543356 PRKAG3Q9UGI9 489 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 NOTCH4Q99466 2003 aa9.45□□□□□ -0.9
GNE-206ENST00000543356 LOC285095A0A1B0GVY8 99 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 FAM47DPA6NHR8 397 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 ZNF197O14709 1029 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 SCAMP3O14828 347 aaKnown RBP9.44□□□□□ -0.9
GNE-206ENST00000543356 MUSKO15146 869 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 ATP9BO43861 1147 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 ZMPSTE24O75844 475 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 KRT38O76015 456 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 CES1P23141 567 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 GLDCP23378 1020 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 ARF5P84085 180 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 USP4Q13107 963 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 CDH18Q13634 790 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 DUSP6Q16828 381 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 PKN3Q6P5Z2 889 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 ADGRD2Q7Z7M1 963 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 RASSF3Q86WH2 238 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 DCAF4L2Q8NA75 395 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 FEM1CQ96JP0 617 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 SEMA3CQ99985 751 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 TCAF1Q9Y4C2 921 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.44□□□□□ -0.9
GNE-206ENST00000543356 CXorf51AA0A1B0GTR3 108 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 A0A1W2PPM1 405 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 PER2O15055 1255 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 TYROBPO43914 113 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 EPOP01588 193 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 SNRPAP09012 282 aaKnown RBP9.44□□□□□ -0.9
GNE-206ENST00000543356 TPH1P17752 444 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 GBP2P32456 591 aaPredicted RBP9.44□□□□□ -0.9
GNE-206ENST00000543356 PBX2P40425 430 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 CSKP41240 450 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 IHHQ14623 411 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 RAB30Q15771 203 aa9.44□□□□□ -0.9
GNE-206ENST00000543356 PCSK7Q16549 785 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms