RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 CNBD2Q96M20 576 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 MED10Q9BTT4 135 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 OCEL1Q9H607 264 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 SUCOQ9UBS9 1254 aaKnown RBP13.1□□□□□ -0.31
PTCD2-212ENST00000543322 ACOT9Q9Y305 439 aa13.1□□□□□ -0.31
PTCD2-212ENST00000543322 TANC1Q9C0D5 1861 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 H0YJX3 145 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 JCHAINP01591 159 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 FAM58BPP0C7Q3 252 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 SAT1P21673 171 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 LRPAP1P30533 357 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 MSX2P35548 267 aaPredicted RBP13.09□□□□□ -0.31
PTCD2-212ENST00000543322 DNAJB13P59910 316 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 ZNF33AQ06730 810 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 TTLL12Q14166 644 aaPredicted RBP13.09□□□□□ -0.31
PTCD2-212ENST00000543322 PTK2BQ14289 1009 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 GK3PQ14409 553 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 ARL13BQ3SXY8 428 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.09□□□□□ -0.31
PTCD2-212ENST00000543322 RAB41Q5JT25 222 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 PCID2Q5JVF3 399 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 BORAQ6PGQ7 559 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 KLHDC10Q6PID8 442 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 B3GNT6Q6ZMB0 384 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 CHSY3Q70JA7 882 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 GPRIN1Q7Z2K8 1008 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 ZNF467Q7Z7K2 595 aaPredicted RBP13.09□□□□□ -0.31
PTCD2-212ENST00000543322 CEP97Q8IW35 865 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 SULF1Q8IWU6 871 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 RNF148Q8N7C7 305 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 DRAXINQ8NBI3 349 aaPredicted RBP13.09□□□□□ -0.31
PTCD2-212ENST00000543322 B4GALNT2Q8NHY0 566 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 EZH1Q92800 747 aaPredicted RBP13.09□□□□□ -0.31
PTCD2-212ENST00000543322 NPAS2Q99743 824 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 TBL1YQ9BQ87 522 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 MRPL46Q9H2W6 279 aaKnown RBP13.09□□□□□ -0.31
PTCD2-212ENST00000543322 CRTAC1Q9NQ79 661 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 CNGB3Q9NQW8 809 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 DDIT4Q9NX09 232 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 RRN3Q9NYV6 651 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 UBP1Q9NZI7 540 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.09□□□□□ -0.31
PTCD2-212ENST00000543322 DMTF1Q9Y222 760 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 PIN4Q9Y237 131 aaKnown RBP13.09□□□□□ -0.31
PTCD2-212ENST00000543322 SNX10Q9Y5X0 201 aa13.09□□□□□ -0.31
PTCD2-212ENST00000543322 FAM95CA0A1B0GW59 222 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 TMEM233B4DJY2 109 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 BTBD19C9JJ37 291 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 STRNO43815 780 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 RNASEH2AO75792 299 aaKnown RBP13.08□□□□□ -0.31
PTCD2-212ENST00000543322 SNAI1O95863 264 aaPredicted RBP13.08□□□□□ -0.31
PTCD2-212ENST00000543322 YBX3P16989 372 aaKnown RBP eCLIP13.08□□□□□ -0.31
PTCD2-212ENST00000543322 SMPD1P17405 629 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 CXCR3P49682 368 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 MPP1Q00013 466 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 ZNF460Q14592 562 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 DGKDQ16760 1214 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 C6orf52Q5T4I8 152 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 WSCD1Q658N2 575 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 MOB2Q70IA6 237 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 OTOP3Q7RTS5 596 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 BHLHA9Q7RTU4 235 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 PIWIL4Q7Z3Z4 852 aaKnown RBP13.08□□□□□ -0.31
PTCD2-212ENST00000543322 CCDC117Q8IWD4 279 aaPredicted RBP13.08□□□□□ -0.31
PTCD2-212ENST00000543322 CHERPQ8IWX8 916 aaKnown RBP13.08□□□□□ -0.31
PTCD2-212ENST00000543322 TXNDC5Q8NBS9 432 aaKnown RBP13.08□□□□□ -0.31
PTCD2-212ENST00000543322 DDI1Q8WTU0 396 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 TOP1MTQ969P6 601 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 DCPSQ96C86 337 aaKnown RBP13.08□□□□□ -0.31
PTCD2-212ENST00000543322 NXNL1Q96CM4 212 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 ASB9Q96DX5 294 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 TMA16Q96EY4 203 aaKnown RBP13.08□□□□□ -0.31
PTCD2-212ENST00000543322 SMOQ99835 787 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 COLEC11Q9BWP8 271 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 GRIP2Q9C0E4 1043 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 SARDHQ9UL12 918 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 TMCO1Q9UM00 188 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 PCDHGA7Q9Y5G6 932 aa13.08□□□□□ -0.31
PTCD2-212ENST00000543322 A0A087X1B8 175 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 SMIM35A0A1B0GVV1 85 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 CCDC78A2IDD5 438 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 LRIG2O94898 1065 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 STMN1P16949 149 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 ARNTP27540 789 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 ARCN1P48444 511 aaKnown RBP13.08□□□□□ -0.32
PTCD2-212ENST00000543322 PSME3P61289 254 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 COG7P83436 770 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 MYLK3Q32MK0 819 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 DUSP28Q4G0W2 176 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 PM20D1Q6GTS8 502 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 GK5Q6ZS86 529 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 FAM35AQ86V20 835 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 DENND6AQ8IWF6 608 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 ARRDC4Q8NCT1 418 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 ZMIZ2Q8NF64 920 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 OR6J1Q8NGC5 347 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 CEP70Q8NHQ1 597 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 HMGCLL1Q8TB92 370 aa13.08□□□□□ -0.32
PTCD2-212ENST00000543322 HIC2Q96JB3 615 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms