RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 SPECC1L-ADORA2AF8WAN1 911 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 DYNC1I1O14576 645 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 PMPCBO75439 489 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 KAT7O95251 611 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 MT-CYBP00156 380 aaPredicted RBP10.82□□□□□ -0.68
DDB1-221ENST00000543162 SRPRAP08240 638 aaKnown RBP10.82□□□□□ -0.68
DDB1-221ENST00000543162 SERPINF2P08697 491 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 FAM153BP0C7A2 387 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 H2AFXP16104 143 aaPredicted RBP10.82□□□□□ -0.68
DDB1-221ENST00000543162 GRIA2P42262 883 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 RGRP47804 291 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 SCNN1BP51168 640 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 ARL4CP56559 192 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 ST8SIA6P61647 398 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 PFKPQ01813 784 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 NSUN2Q08J23 767 aaKnown RBP eCLIP10.82□□□□□ -0.68
DDB1-221ENST00000543162 MPP3Q13368 585 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 TDGQ13569 410 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 SPARCL1Q14515 664 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 DLG2Q15700 870 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 HIF1AQ16665 826 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 FAM153CQ494X1 144 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 DGKKQ5KSL6 1271 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 KCTD11Q693B1 232 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 C22orf39Q6P5X5 142 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 EMBQ6PCB8 327 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 CEP128Q6ZU80 1094 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 PRPF39Q86UA1 669 aaKnown RBP10.82□□□□□ -0.68
DDB1-221ENST00000543162 CCDC25Q86WR0 208 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 RNF135Q8IUD6 432 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 SUGP1Q8IWZ8 645 aaKnown RBP10.82□□□□□ -0.68
DDB1-221ENST00000543162 KLHDC8BQ8IXV7 354 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 PCDH20Q8N6Y1 951 aaKnown RBP10.82□□□□□ -0.68
DDB1-221ENST00000543162 MCUQ8NE86 351 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 IPMKQ8NFU5 416 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 ARRDC2Q8TBH0 407 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 AENQ8WTP8 325 aaKnown RBP10.82□□□□□ -0.68
DDB1-221ENST00000543162 UCMAQ8WVF2 138 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 ISG20Q96AZ6 181 aaKnown RBP10.82□□□□□ -0.68
DDB1-221ENST00000543162 CHFRQ96EP1 664 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 NUDCD1Q96RS6 583 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 P2RY13Q9BPV8 354 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 FRMD8Q9BZ67 464 aaPredicted RBP10.82□□□□□ -0.68
DDB1-221ENST00000543162 TM6SF2Q9BZW4 377 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 CEP44Q9C0F1 390 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 C8orf33Q9H7E9 229 aaPredicted RBP10.82□□□□□ -0.68
DDB1-221ENST00000543162 NOD2Q9HC29 1040 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 XAB2Q9HCS7 855 aaKnown RBP10.82□□□□□ -0.68
DDB1-221ENST00000543162 VPS45Q9NRW7 570 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 THEGQ9P2T0 379 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 SLCO3A1Q9UIG8 710 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 PLA2G4CQ9UP65 541 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 C5orf42Q9H799 3197 aa10.82□□□□□ -0.68
DDB1-221ENST00000543162 MYO10Q9HD67 2058 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 INSIG1O15503 277 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 ATP9BO43861 1147 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 GJB3O75712 270 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 SUN1O94901 812 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 IGSF6O95976 241 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 MMP2P08253 660 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 SRFP11831 508 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 CR2P20023 1033 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 CTHP32929 405 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 TNNT3P45378 269 aaPredicted RBP10.81□□□□□ -0.68
DDB1-221ENST00000543162 MAPK8P45983 427 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 CSNK1DP48730 415 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 VASPP50552 380 aaPredicted RBP10.81□□□□□ -0.68
DDB1-221ENST00000543162 GALK1P51570 392 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 WNT3AP56704 352 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 AP1S1P61966 158 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 SNRPD1P62314 119 aaKnown RBP10.81□□□□□ -0.68
DDB1-221ENST00000543162 SKOR1P84550 965 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 SLC14A2Q15849 920 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 PCSK7Q16549 785 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 FNDC3BQ53EP0 1204 aaKnown RBP10.81□□□□□ -0.68
DDB1-221ENST00000543162 RALGPS1Q5JS13 557 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 ATXN7L2Q5T6C5 722 aaPredicted RBP10.81□□□□□ -0.68
DDB1-221ENST00000543162 NAPEPLDQ6IQ20 393 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 FBXO38Q6PIJ6 1188 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 KDELC1Q6UW63 502 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 CENPUQ71F23 418 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 SRLQ86TD4 932 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 LINC00523Q86TU6 105 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 RALGPS2Q86X27 583 aaPredicted RBP10.81□□□□□ -0.68
DDB1-221ENST00000543162 ADHFE1Q8IWW8 467 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 PDIK1LQ8N165 341 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 RYBPQ8N488 228 aaPredicted RBP10.81□□□□□ -0.68
DDB1-221ENST00000543162 OR2AP1Q8NGE2 309 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 HNRNPLLQ8WVV9 542 aaKnown RBP10.81□□□□□ -0.68
DDB1-221ENST00000543162 TADA1Q96BN2 335 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 MRGPRX3Q96LB0 322 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 GDAP1L1Q96MZ0 367 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 PWWP2AQ96N64 755 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 FICDQ9BVA6 458 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 FSD1LQ9BXM9 530 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 TNKS2Q9H2K2 1166 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 HEBP1Q9NRV9 189 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 PRKAG3Q9UGI9 489 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 PIAS3Q9Y6X2 628 aa10.81□□□□□ -0.68
DDB1-221ENST00000543162 TTC34A8MYJ7 566 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms