RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 UBA2Q9UBT2 640 aaPredicted RBP11.18□□□□□ -0.62
SCG3-202ENST00000542355 CHD9Q3L8U1 2897 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 MYO18AQ92614 2054 aaKnown RBP11.17□□□□□ -0.62
SCG3-202ENST00000542355 A0A1W2PPM1 405 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 FAM155BO75949 473 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 LUC7L3O95232 432 aaKnown RBP11.17□□□□□ -0.62
SCG3-202ENST00000542355 MMP2P08253 660 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 BRAFP15056 766 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 DDX6P26196 483 aaKnown RBP eCLIP11.17□□□□□ -0.62
SCG3-202ENST00000542355 NRIP1P48552 1158 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 NR1H3Q13133 447 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 CBX2Q14781 532 aaPredicted RBP11.17□□□□□ -0.62
SCG3-202ENST00000542355 STEAP4Q687X5 459 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 DENND5AQ6IQ26 1287 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 KDELC1Q6UW63 502 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 CYS1Q717R9 158 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 TRABD2AQ86V40 505 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 SLC26A11Q86WA9 606 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 SLC25A41Q8N5S1 370 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 ARRDC2Q8TBH0 407 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 USP13Q92995 863 aaPredicted RBP11.17□□□□□ -0.62
SCG3-202ENST00000542355 MFSD3Q96ES6 412 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 ZSWIM3Q96MP5 696 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 SEMA3CQ99985 751 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 POLR1EQ9GZS1 481 aaKnown RBP11.17□□□□□ -0.62
SCG3-202ENST00000542355 IL22Q9GZX6 179 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 CNOT10Q9H9A5 744 aaKnown RBP11.17□□□□□ -0.62
SCG3-202ENST00000542355 KIF9Q9HAQ2 790 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 PIDD1Q9HB75 910 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 TDP1Q9NUW8 608 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 IL1RAPL1Q9NZN1 696 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 MSRAQ9UJ68 235 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 NYNRINQ9P2P1 1898 aaKnown RBP11.17□□□□□ -0.62
SCG3-202ENST00000542355 MAGEB16A2A368 324 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 UGT1A9O60656 530 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 ALDH1A2O94788 518 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 CHN1P15882 459 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 CHRNA4P43681 627 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 POU6F1Q14863 301 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 ANKRD20A4Q4UJ75 823 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 MPPE1Q53F39 396 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 PRSS36Q5K4E3 855 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 COL13A1Q5TAT6 717 aaPredicted RBP11.17□□□□□ -0.62
SCG3-202ENST00000542355 TMC5Q6UXY8 1006 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 LINGO4Q6UY18 593 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 TMEM135Q86UB9 458 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 MFN1Q8IWA4 741 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 BBS5Q8N3I7 341 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 CPXM2Q8N436 756 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 LEMD2Q8NC56 503 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 RIN3Q8TB24 985 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 WFDC5Q8TCV5 224 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 GDPD5Q8WTR4 605 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 ING5Q8WYH8 240 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 TTC17Q96AE7 1141 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 ZNF669Q96BR6 464 aaPredicted RBP11.17□□□□□ -0.62
SCG3-202ENST00000542355 ZNF707Q96C28 371 aaPredicted RBP11.17□□□□□ -0.62
SCG3-202ENST00000542355 FEM1AQ9BSK4 669 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 CINPQ9BW66 212 aaPredicted RBP11.17□□□□□ -0.62
SCG3-202ENST00000542355 UGT1A7Q9HAW7 530 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 UGT1A10Q9HAW8 530 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 UGT1A8Q9HAW9 530 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 VPS45Q9NRW7 570 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 SEPT3Q9UH03 358 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 VPS28Q9UK41 221 aa11.17□□□□□ -0.62
SCG3-202ENST00000542355 SHROOM3Q8TF72 1996 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 ANAPC1Q9H1A4 1944 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 E2F8A0AVK6 867 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 TMEM120BA0PK00 339 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 CCDC78A2IDD5 438 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 FAM159BA6NKW6 160 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 SNAP91O60641 907 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 ERVK-10P10266 1014 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 CSKP41240 450 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 ARF5P84085 180 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 SPANXN3Q5MJ09 141 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 ELMSAN1Q6PJG2 1045 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 ZNF783Q6ZMS7 281 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 C4orf33Q8N1A6 199 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 EXOC2Q96KP1 924 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 ZNF778Q96MU6 729 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 PSKH2Q96QS6 385 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 TRABDQ9H4I3 376 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 SLC28A3Q9HAS3 691 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.16□□□□□ -0.62
SCG3-202ENST00000542355 CLEC4EQ9ULY5 219 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 DOCK4Q8N1I0 1966 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 IQANK1A0A1B0GTG1 560 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 FAM237BA0A1B0GVD1 139 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 EPOPA6NHQ4 379 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 RFXAPO00287 272 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 ZNF197O14709 1029 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 SHOX2O60902 331 aaPredicted RBP11.16□□□□□ -0.62
SCG3-202ENST00000542355 USP1O94782 785 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 PRAMEF12O95522 483 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 NMBRP28336 390 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 SCNN1BP51168 640 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 RFTN1Q14699 578 aaPredicted RBP11.16□□□□□ -0.62
SCG3-202ENST00000542355 CYTH1Q15438 398 aa11.16□□□□□ -0.62
SCG3-202ENST00000542355 PCID2Q5JVF3 399 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms