RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 FEZF2Q8TBJ5 459 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 LRRC15Q8TF66 581 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 HASPINQ8TF76 798 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 CACTINQ8WUQ7 758 aaKnown RBP5.74□□□□□ -1.49
CPSF7-220ENST00000541963 STAMQ92783 540 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 GNRHR2Q96P88 292 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 FIZ1Q96SL8 496 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 PAAF1Q9BRP4 392 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 NDC1Q9BTX1 674 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 C1orf43Q9BWL3 253 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 VN1R3Q9BXE9 311 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 TRIM9Q9C026 710 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 SIK2Q9H0K1 926 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 S1PR5Q9H228 398 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 GSTO2Q9H4Y5 243 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 JKAMPQ9P055 326 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 TBC1D7Q9P0N9 293 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 SLC23A1Q9UHI7 598 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 CPSF3Q9UKF6 684 aaKnown RBP5.74□□□□□ -1.49
CPSF7-220ENST00000541963 USP15Q9Y4E8 981 aaPredicted RBP5.74□□□□□ -1.49
CPSF7-220ENST00000541963 PAXBP1Q9Y5B6 917 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 STYXL1Q9Y6J8 313 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 CHD7Q9P2D1 2997 aa5.74□□□□□ -1.49
CPSF7-220ENST00000541963 CHD9Q3L8U1 2897 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 CCDC195A0A1B0GUA6 201 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 TTC26A0AVF1 554 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 ANKRD63C9JTQ0 380 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 PI4K2BG5E9Z4 385 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 MYO1CO00159 1063 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 EIF3DO15371 548 aaKnown RBP eCLIP5.73□□□□□ -1.49
CPSF7-220ENST00000541963 EXTL3O43909 919 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 PLATP00750 562 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 AHSGP02765 367 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 ADRB2P07550 413 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 CXCL8P10145 99 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 LRPAP1P30533 357 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 MSX2P35548 267 aaPredicted RBP5.73□□□□□ -1.49
CPSF7-220ENST00000541963 TNFSF9P41273 254 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 SYKP43405 635 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 HTR3AP46098 478 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 ACOT2P49753 483 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 SUMO3P55854 103 aaPredicted RBP5.73□□□□□ -1.49
CPSF7-220ENST00000541963 TMEM132DQ14C87 1099 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 ZBTB6Q15916 424 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 HS1BP3Q53T59 392 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 RARS2Q5T160 578 aaKnown RBP5.73□□□□□ -1.49
CPSF7-220ENST00000541963 LIN9Q5TKA1 542 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 EMC10Q5UCC4 262 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 SPATA1Q5VX52 437 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 ANKS6Q68DC2 871 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 ARMCX5Q6P1M9 558 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 DSTYKQ6XUX3 929 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 C15orf39Q6ZRI6 1047 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 GPR149Q86SP6 731 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 USP37Q86T82 979 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 DCBLD1Q8N8Z6 715 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 CMASQ8NFW8 434 aaPredicted RBP5.73□□□□□ -1.49
CPSF7-220ENST00000541963 VN1R2Q8NFZ6 395 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 LNX1Q8TBB1 728 aaPredicted RBP5.73□□□□□ -1.49
CPSF7-220ENST00000541963 KBTBD7Q8WVZ9 684 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 SUSD6Q92537 303 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 RPGRIP1Q96KN7 1286 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 ZMAT2Q96NC0 199 aaKnown RBP5.73□□□□□ -1.49
CPSF7-220ENST00000541963 STRA6Q9BX79 667 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 PDCL3Q9H2J4 239 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 PNPLA8Q9NP80 782 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.73□□□□□ -1.49
CPSF7-220ENST00000541963 ZDHHC7Q9NXF8 308 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 FAM30AQ9NZY2 134 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.73□□□□□ -1.49
CPSF7-220ENST00000541963 CGNQ9P2M7 1197 aaKnown RBP5.73□□□□□ -1.49
CPSF7-220ENST00000541963 MAFFQ9ULX9 164 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 ZFR2Q9UPR6 939 aaKnown RBP5.73□□□□□ -1.49
CPSF7-220ENST00000541963 CORO2BQ9UQ03 480 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 C2CD2Q9Y426 696 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.73□□□□□ -1.49
CPSF7-220ENST00000541963 CITO14578 2027 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 UBE4BO95155 1302 aa5.73□□□□□ -1.49
CPSF7-220ENST00000541963 ATG2AQ2TAZ0 1938 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 EYSQ5T1H1 3165 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 A0A1B0GVL5 298 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 ZNF233A6NK53 670 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 LOC730098B7Z3J9 87 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 F8W810 466 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 DCXO43602 365 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 HNRNPA1P09651 372 aaKnown RBP eCLIP5.72□□□□□ -1.49
CPSF7-220ENST00000541963 PFKFB1P16118 471 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 TKTP29401 623 aaKnown RBP5.72□□□□□ -1.49
CPSF7-220ENST00000541963 OR1D2P34982 312 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 PNPLA4P41247 253 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 BRCC3P46736 316 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 FMO1Q01740 532 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 YWHAHQ04917 246 aaPredicted RBP5.72□□□□□ -1.49
CPSF7-220ENST00000541963 SPAG1Q07617 926 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 CTXN3Q4LDR2 81 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 PPM1LQ5SGD2 360 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 JADE1Q6IE81 842 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 ZNF280DQ6N043 979 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 SLC39A4Q6P5W5 647 aa5.72□□□□□ -1.49
CPSF7-220ENST00000541963 DRICH1Q6PGQ1 229 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms