RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 RAXQ9Y2V3 346 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 ITPR1Q14643 2758 aa12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 TDRD6O60522 2096 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-211ENST00000541667 LY6G6EA0A0G2JKS1 128 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 C16orf96A6NNT2 1141 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 WASH4PA8MWX3 477 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 AREL1O15033 823 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 CCP110O43303 1012 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 SIGLEC6O43699 453 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 RFPL3O75679 317 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 PCDH8O95206 1070 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 CALB1P05937 261 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 CKMT2P17540 419 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 ITIH2P19823 946 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 ACP1P24666 158 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 RECQLP46063 649 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 NSFP46459 744 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 DNA2P51530 1060 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 NEK3P51956 506 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 CCDC15Q0P6D6 951 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 ZNF211Q13398 564 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 STX1AQ16623 288 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 MYLK3Q32MK0 819 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 ACAD10Q6JQN1 1059 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 KDM7AQ6ZMT4 941 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 Q6ZSR6 202 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 SLFN11Q7Z7L1 901 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 MCOLN2Q8IZK6 566 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 PDCD7Q8N8D1 485 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 OR6K2Q8NGY2 324 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 RFFLQ8WZ73 363 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 TBC1D31Q96DN5 1066 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 LENG8Q96PV6 779 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 TM6SF2Q9BZW4 377 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 RTN4Q9NQC3 1192 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 KLF15Q9UIH9 416 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 GGT7Q9UJ14 662 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 FZD10Q9ULW2 581 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 U3KQA8 63 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 ASXL3Q9C0F0 2248 aa12.01□□□□□ -0.49
CLSTN3-211ENST00000541667 MYLKQ15746 1914 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 IGLON5A6NGN9 336 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 RAMP2O60895 175 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 PIAS2O75928 621 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 POP4O95707 220 aaKnown RBP12□□□□□ -0.49
CLSTN3-211ENST00000541667 GSRP00390 522 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 CDK4P11802 303 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 AKT2P31751 481 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 ETFBP38117 255 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 ANP32AP39687 249 aaKnown RBP12□□□□□ -0.49
CLSTN3-211ENST00000541667 RPS21P63220 83 aaKnown RBP12□□□□□ -0.49
CLSTN3-211ENST00000541667 TYRO3Q06418 890 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 TARDBPQ13148 414 aaKnown RBP eCLIP12□□□□□ -0.49
CLSTN3-211ENST00000541667 ILKQ13418 452 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 FZD2Q14332 565 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 POLD3Q15054 466 aaPredicted RBP12□□□□□ -0.49
CLSTN3-211ENST00000541667 CYTH1Q15438 398 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 ZNF805Q5CZA5 627 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 ATXN7L2Q5T6C5 722 aaPredicted RBP12□□□□□ -0.49
CLSTN3-211ENST00000541667 KIAA1161Q6NSJ0 714 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 C19orf48Q6RUI8 117 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 DNAAF5Q86Y56 855 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 CACTIN-AS1Q8N1I8 211 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 RTL3Q8N8U3 475 aaKnown RBP12□□□□□ -0.49
CLSTN3-211ENST00000541667 OR2AP1Q8NGE2 309 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 OR4C6Q8NH72 309 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 ASB12Q8WXK4 309 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 CENPTQ96BT3 561 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 IFT43Q96FT9 208 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 LRIG1Q96JA1 1093 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 FEM1CQ96JP0 617 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 GBP4Q96PP9 640 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 SELENOOQ9BVL4 669 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 DYRK4Q9NR20 520 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 PNMA8BQ9ULN7 279 aaPredicted RBP12□□□□□ -0.49
CLSTN3-211ENST00000541667 LHX6Q9UPM6 363 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 ITM2BQ9Y287 266 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 MFHAS1Q9Y4C4 1052 aa12□□□□□ -0.49
CLSTN3-211ENST00000541667 LOC400499M0QZD8 3231 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 SPTY2D1-AS1A0A0U1RR47 76 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 INSIG1O15503 277 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 TPM2P07951 284 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 MYF5P13349 255 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 JUPP14923 745 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 TIMP2P16035 220 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 CDK11BP21127 795 aaKnown RBP11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 PFN3P60673 137 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 INSM1Q01101 510 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 MAMLD1Q13495 774 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 INO80DQ53TQ3 878 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 ZNF542PQ5EBM4 170 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 CCDC183Q5T5S1 534 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 E4F1Q66K89 784 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 PLEKHA7Q6IQ23 1121 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 CYP4V2Q6ZWL3 525 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 UMODL1-AS1Q8N2C9 162 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 AOPEPQ8N6M6 819 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 HMCESQ96FZ2 354 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 PPP1R16AQ96I34 528 aa11.99□□□□□ -0.49
CLSTN3-211ENST00000541667 VCPIP1Q96JH7 1222 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms