RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 GCAP28676 217 aa8.82□□□□□ -1
THBS3-210ENST00000541576 SESN2P58004 480 aaPredicted RBP8.82□□□□□ -1
THBS3-210ENST00000541576 ITKQ08881 620 aa8.82□□□□□ -1
THBS3-210ENST00000541576 RNF219Q5W0B1 726 aaPredicted RBP8.82□□□□□ -1
THBS3-210ENST00000541576 ZNF783Q6ZMS7 281 aa8.82□□□□□ -1
THBS3-210ENST00000541576 TPGS1Q6ZTW0 290 aa8.82□□□□□ -1
THBS3-210ENST00000541576 CYP4X1Q8N118 509 aa8.82□□□□□ -1
THBS3-210ENST00000541576 ARMC2Q8NEN0 867 aa8.82□□□□□ -1
THBS3-210ENST00000541576 SPATA22Q8NHS9 363 aa8.82□□□□□ -1
THBS3-210ENST00000541576 ITFG1Q8TB96 612 aa8.82□□□□□ -1
THBS3-210ENST00000541576 TLCD1Q96CP7 247 aa8.82□□□□□ -1
THBS3-210ENST00000541576 PGM2Q96G03 612 aa8.82□□□□□ -1
THBS3-210ENST00000541576 ZSWIM3Q96MP5 696 aa8.82□□□□□ -1
THBS3-210ENST00000541576 ZNF599Q96NL3 588 aa8.82□□□□□ -1
THBS3-210ENST00000541576 SLC25A51Q9H1U9 297 aa8.82□□□□□ -1
THBS3-210ENST00000541576 PDFQ9HBH1 243 aa8.82□□□□□ -1
THBS3-210ENST00000541576 ZC3H7BQ9UGR2 993 aaKnown RBP8.82□□□□□ -1
THBS3-210ENST00000541576 RABGEF1Q9UJ41 708 aa8.82□□□□□ -1
THBS3-210ENST00000541576 TRIM33Q9UPN9 1127 aa8.82□□□□□ -1
THBS3-210ENST00000541576 H0Y3Z8 333 aa8.81□□□□□ -1
THBS3-210ENST00000541576 KDELR3O43731 214 aa8.81□□□□□ -1
THBS3-210ENST00000541576 PAPLNO95428 1278 aa8.81□□□□□ -1
THBS3-210ENST00000541576 MT-CYBP00156 380 aaPredicted RBP8.81□□□□□ -1
THBS3-210ENST00000541576 CALRP27797 417 aaKnown RBP8.81□□□□□ -1
THBS3-210ENST00000541576 GEMP55040 296 aa8.81□□□□□ -1
THBS3-210ENST00000541576 KCNJ2P63252 427 aa8.81□□□□□ -1
THBS3-210ENST00000541576 CRADDP78560 199 aa8.81□□□□□ -1
THBS3-210ENST00000541576 TNK2Q07912 1038 aa8.81□□□□□ -1
THBS3-210ENST00000541576 ZNF235Q14590 738 aa8.81□□□□□ -1
THBS3-210ENST00000541576 CBX2Q14781 532 aaPredicted RBP8.81□□□□□ -1
THBS3-210ENST00000541576 CRYMQ14894 314 aa8.81□□□□□ -1
THBS3-210ENST00000541576 TNFAIP8L3Q5GJ75 292 aa8.81□□□□□ -1
THBS3-210ENST00000541576 FSCBQ5H9T9 825 aa8.81□□□□□ -1
THBS3-210ENST00000541576 MPP7Q5T2T1 576 aa8.81□□□□□ -1
THBS3-210ENST00000541576 CAPRIN2Q6IMN6 1127 aaKnown RBP8.81□□□□□ -1
THBS3-210ENST00000541576 NAPEPLDQ6IQ20 393 aa8.81□□□□□ -1
THBS3-210ENST00000541576 ARID3BQ8IVW6 561 aaPredicted RBP8.81□□□□□ -1
THBS3-210ENST00000541576 MFN1Q8IWA4 741 aa8.81□□□□□ -1
THBS3-210ENST00000541576 CCDC117Q8IWD4 279 aaPredicted RBP8.81□□□□□ -1
THBS3-210ENST00000541576 KLHDC8BQ8IXV7 354 aa8.81□□□□□ -1
THBS3-210ENST00000541576 ARFGAP2Q8N6H7 521 aa8.81□□□□□ -1
THBS3-210ENST00000541576 OR52K1Q8NGK4 314 aa8.81□□□□□ -1
THBS3-210ENST00000541576 FBF1Q8TES7 1133 aa8.81□□□□□ -1
THBS3-210ENST00000541576 EBNA1BP2Q99848 306 aaKnown RBP8.81□□□□□ -1
THBS3-210ENST00000541576 EXOC1LA0A1B0GW35 172 aa8.81□□□□□ -1
THBS3-210ENST00000541576 SDR42E2A6NKP2 422 aa8.81□□□□□ -1
THBS3-210ENST00000541576 CBX4O00257 560 aa8.81□□□□□ -1
THBS3-210ENST00000541576 RGS16O15492 202 aaPredicted RBP8.81□□□□□ -1
THBS3-210ENST00000541576 SPAG6O75602 509 aa8.81□□□□□ -1
THBS3-210ENST00000541576 CYBBP04839 570 aa8.81□□□□□ -1
THBS3-210ENST00000541576 MAXP61244 160 aa8.81□□□□□ -1
THBS3-210ENST00000541576 ELF3P78545 371 aaPredicted RBP8.81□□□□□ -1
THBS3-210ENST00000541576 EFTUD2Q15029 972 aaKnown RBP eCLIP8.81□□□□□ -1
THBS3-210ENST00000541576 RARS2Q5T160 578 aaKnown RBP8.81□□□□□ -1
THBS3-210ENST00000541576 CASC4Q6P4E1 433 aa8.81□□□□□ -1
THBS3-210ENST00000541576 LINC00523Q86TU6 105 aa8.81□□□□□ -1
THBS3-210ENST00000541576 BBS5Q8N3I7 341 aa8.81□□□□□ -1
THBS3-210ENST00000541576 DNAAF3Q8N9W5 541 aa8.81□□□□□ -1
THBS3-210ENST00000541576 IPMKQ8NFU5 416 aa8.81□□□□□ -1
THBS3-210ENST00000541576 RIN3Q8TB24 985 aa8.81□□□□□ -1
THBS3-210ENST00000541576 AGAP11Q8TF27 550 aa8.81□□□□□ -1
THBS3-210ENST00000541576 CFAP36Q96G28 342 aa8.81□□□□□ -1
THBS3-210ENST00000541576 APOL2Q9BQE5 337 aa8.81□□□□□ -1
THBS3-210ENST00000541576 ACE2Q9BYF1 805 aaPredicted RBP8.81□□□□□ -1
THBS3-210ENST00000541576 EURLQ9NYK6 297 aa8.81□□□□□ -1
THBS3-210ENST00000541576 PLK2Q9NYY3 685 aa8.81□□□□□ -1
THBS3-210ENST00000541576 UBA2Q9UBT2 640 aaPredicted RBP8.81□□□□□ -1
THBS3-210ENST00000541576 GLDCP23378 1020 aa8.8□□□□□ -1
THBS3-210ENST00000541576 MGAT1P26572 445 aa8.8□□□□□ -1
THBS3-210ENST00000541576 SESN3P58005 492 aa8.8□□□□□ -1
THBS3-210ENST00000541576 ZNF77Q15935 545 aa8.8□□□□□ -1
THBS3-210ENST00000541576 POTEHQ6S545 545 aa8.8□□□□□ -1
THBS3-210ENST00000541576 PRPF39Q86UA1 669 aaKnown RBP8.8□□□□□ -1
THBS3-210ENST00000541576 ANKRD42Q8N9B4 389 aa8.8□□□□□ -1
THBS3-210ENST00000541576 MRRFQ96E11 262 aaKnown RBP8.8□□□□□ -1
THBS3-210ENST00000541576 POLR1EQ9GZS1 481 aaKnown RBP8.8□□□□□ -1
THBS3-210ENST00000541576 NSUN3Q9H649 340 aaKnown RBP8.8□□□□□ -1
THBS3-210ENST00000541576 CASS4Q9NQ75 786 aa8.8□□□□□ -1
THBS3-210ENST00000541576 BFARQ9NZS9 450 aa8.8□□□□□ -1
THBS3-210ENST00000541576 VPS28Q9UK41 221 aa8.8□□□□□ -1
THBS3-210ENST00000541576 ACTL7AQ9Y615 435 aa8.8□□□□□ -1
THBS3-210ENST00000541576 TCRBV9S1A1TA0A576 114 aa8.8□□□□□ -1
THBS3-210ENST00000541576 POC1B-GALNT4F8VUJ3 575 aa8.8□□□□□ -1
THBS3-210ENST00000541576 TNRC18O15417 2968 aaPredicted RBP8.8□□□□□ -1
THBS3-210ENST00000541576 PMPCBO75439 489 aa8.8□□□□□ -1
THBS3-210ENST00000541576 C1QAP02745 245 aa8.8□□□□□ -1
THBS3-210ENST00000541576 MZF1P28698 734 aaPredicted RBP8.8□□□□□ -1
THBS3-210ENST00000541576 SLC8A1P32418 973 aa8.8□□□□□ -1
THBS3-210ENST00000541576 CSKP41240 450 aa8.8□□□□□ -1
THBS3-210ENST00000541576 PPP2R2AP63151 447 aa8.8□□□□□ -1
THBS3-210ENST00000541576 USP4Q13107 963 aa8.8□□□□□ -1
THBS3-210ENST00000541576 MPP3Q13368 585 aa8.8□□□□□ -1
THBS3-210ENST00000541576 IHHQ14623 411 aa8.8□□□□□ -1
THBS3-210ENST00000541576 UNC5AQ6ZN44 842 aa8.8□□□□□ -1
THBS3-210ENST00000541576 SPATS2Q86XZ4 545 aaKnown RBP8.8□□□□□ -1
THBS3-210ENST00000541576 PGBD5Q8N414 524 aa8.8□□□□□ -1
THBS3-210ENST00000541576 CCDC197Q8NCU1 140 aa8.8□□□□□ -1
THBS3-210ENST00000541576 WFDC5Q8TCV5 224 aa8.8□□□□□ -1
THBS3-210ENST00000541576 IMP4Q96G21 291 aaKnown RBP8.8□□□□□ -1
THBS3-210ENST00000541576 XPO6Q96QU8 1125 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms