RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 HOXB8P17481 243 aaPredicted RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 MAOBP27338 520 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 CDH5P33151 784 aaPredicted RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 GNG10P50151 68 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 GUCY1A3Q02108 690 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 EDRF1Q3B7T1 1238 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 PIK3R6Q5UE93 754 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 RNF219Q5W0B1 726 aaPredicted RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 FDX2Q6P4F2 183 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 MSANTD1Q6ZTZ1 278 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 TMC3Q7Z5M5 1100 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 TRIM69Q86WT6 500 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 RFX6Q8HWS3 928 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 MICU2Q8IYU8 434 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 KIAA0319LQ8IZA0 1049 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 RGL4Q8IZJ4 473 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 FMR1NBQ8N0W7 255 aaPredicted RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 FBXL6Q8N531 539 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 SEC14L1Q92503 715 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 CRELD1Q96HD1 420 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 SHDQ96IW2 340 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 DACH2Q96NX9 599 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 APOL6Q9BWW8 343 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 TINAGL1Q9GZM7 467 aaPredicted RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 CABP5Q9NP86 173 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 DDX19AQ9NUU7 478 aaKnown RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 MPP6Q9NZW5 540 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 SLC24A2Q9UI40 661 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 FRMPD4Q14CM0 1322 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 TRBV23OR9-2A0A075B6M9 112 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 EFCAB10A6NFE3 127 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 FAM25AB3EWG3 89 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 FAM25CB3EWG5 89 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 FAM25GB3EWG6 89 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 PDE2AO00408 941 aaPredicted RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 SMAD9O15198 467 aaKnown RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 B4GAT1O43505 415 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 JRKO75564 520 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 PGLSO95336 258 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 MMP1P03956 469 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 HLA-DOAP06340 250 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 SPATA31D3P0C874 917 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 STAG3L3P0CL85 134 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 ODC1P11926 461 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 CHRM3P20309 590 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 GLRA2P23416 452 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 PTX3P26022 381 aaPredicted RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 GBX2P52951 348 aaPredicted RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 NUP107P57740 925 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 RNASE9P60153 205 aaKnown RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 SPCS3P61009 180 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 ATP6V0D1P61421 351 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 HNRNPKP61978 463 aaKnown RBP eCLIP6.26□□□□□ -1.41
LMO3-225ENST00000541295 LMAN2Q12907 356 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 SNTA1Q13424 505 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 TRIM16LQ309B1 348 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 CRTC2Q53ET0 693 aaPredicted RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 TNFAIP8L3Q5GJ75 292 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 CDKL4Q5MAI5 379 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 USP17L2Q6R6M4 530 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 SPATA31D4Q6ZUB0 917 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 NLRP8Q86W28 1048 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 ZFPM1Q8IX07 1006 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 ALLCQ8N6M5 410 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 LINC00301Q8NCQ3 95 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 HIPK4Q8NE63 616 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 RAB3IL1Q8TBN0 382 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 SLC2A14Q8TDB8 520 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 THRSPQ92748 146 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 TOE1Q96GM8 510 aaKnown RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 AGAP2Q99490 1192 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 TMEM47Q9BQJ4 181 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 OSBPL6Q9BZF3 934 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 BCL2L14Q9BZR8 327 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 NOL6Q9H6R4 1146 aaKnown RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 TDRD3Q9H7E2 651 aaKnown RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 KCNH7Q9NS40 1196 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 NRBP2Q9NSY0 501 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 SETD4Q9NVD3 440 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 MID2Q9UJV3 735 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 NAV1Q8NEY1 1877 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 CNTNAP5Q8WYK1 1306 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 STK36Q9NRP7 1315 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 GSAPA4D1B5 854 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 A8MXQ7 604 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 ZNF197O14709 1029 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 SCO2O43819 266 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 MAFKO60675 156 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 RALAP11233 206 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 VEGFAP15692 232 aaPredicted RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 TNNI3P19429 210 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 FECHP22830 423 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 WNT5AP41221 380 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 RTP1P59025 263 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 VSNL1P62760 191 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 MAT1AQ00266 395 aaKnown RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 RAB33AQ14088 237 aa6.26□□□□□ -1.41
LMO3-225ENST00000541295 RRP1BQ14684 758 aaKnown RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 TRIP13Q15645 432 aaPredicted RBP6.26□□□□□ -1.41
LMO3-225ENST00000541295 E4F1Q66K89 784 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms