RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 RYBPQ8N488 228 aaPredicted RBP19.05■□□□□ 0.64
VPS33A-205ENST00000541169 CADM4Q8NFZ8 388 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 TFB1MQ8WVM0 346 aaKnown RBP19.05■□□□□ 0.64
VPS33A-205ENST00000541169 FOXJ1Q92949 421 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 VAT1Q99536 393 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 HDAC8Q9BY41 377 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 FRMD8P1Q9BZ68 369 aaPredicted RBP19.05■□□□□ 0.64
VPS33A-205ENST00000541169 TM6SF2Q9BZW4 377 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 BTBD1Q9H0C5 482 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 KCND1Q9NSA2 647 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 FBXL12Q9NXK8 326 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 LHX3Q9UBR4 397 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 IGHV1OR15-9A0A0B4J2B8 117 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 KRIT1O00522 736 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 ITGB7P26010 798 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 PSMD8P48556 350 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 SLC10A7Q0GE19 358 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 LEKR1Q6ZMV7 388 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 ARHGAP36Q6ZRI8 547 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 ZSCAN30Q86W11 494 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 GANCQ8TET4 914 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 MAIP1Q8WWC4 291 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 RAB7BQ96AH8 199 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 FAM131CQ96AQ9 280 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 MGME1Q9BQP7 344 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 POLR1EQ9GZS1 481 aaKnown RBP19.04■□□□□ 0.64
VPS33A-205ENST00000541169 DUSP15Q9H1R2 295 aaPredicted RBP19.04■□□□□ 0.64
VPS33A-205ENST00000541169 ATP13A3Q9H7F0 1226 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 WSB2Q9NYS7 404 aaPredicted RBP19.04■□□□□ 0.64
VPS33A-205ENST00000541169 DKK3Q9UBP4 350 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 PACSIN2Q9UNF0 486 aaPredicted RBP19.04■□□□□ 0.64
VPS33A-205ENST00000541169 WASF2Q9Y6W5 498 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 CACNA1HO95180 2353 aa19.04■□□□□ 0.64
VPS33A-205ENST00000541169 EML5Q05BV3 1969 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 LRRC72A6NJI9 287 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 KPNA3O00505 521 aaPredicted RBP19.03■□□□□ 0.64
VPS33A-205ENST00000541169 MID1O15344 667 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 LEFTY1O75610 366 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 RNASEH2AO75792 299 aaKnown RBP19.03■□□□□ 0.64
VPS33A-205ENST00000541169 NFKBIAP25963 317 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 SERPINA4P29622 427 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 IFI35P80217 286 aaPredicted RBP19.03■□□□□ 0.64
VPS33A-205ENST00000541169 NHLH1Q02575 133 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 ZNF805Q5CZA5 627 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 ARSIQ5FYB1 569 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 LAIR1Q6GTX8 287 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 GDPD4Q6W3E5 623 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 SRLQ86TD4 932 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 TP53INP2Q8IXH6 220 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 TSEN2Q8NCE0 465 aaKnown RBP19.03■□□□□ 0.64
VPS33A-205ENST00000541169 NKD2Q969F2 451 aaPredicted RBP19.03■□□□□ 0.64
VPS33A-205ENST00000541169 NUDCD1Q96RS6 583 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 HEMGNQ9BXL5 484 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 ZDHHC6Q9H6R6 413 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 CYP8B1Q9UNU6 501 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 ACTL7AQ9Y615 435 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 R4GN57 208 aa19.03■□□□□ 0.64
VPS33A-205ENST00000541169 MUC6Q6W4X9 2439 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 LMNAP02545 664 aaKnown RBP19.02■□□□□ 0.64
VPS33A-205ENST00000541169 CA4P22748 312 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 NUDT1P36639 197 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 POLR2LP62875 67 aaKnown RBP19.02■□□□□ 0.64
VPS33A-205ENST00000541169 AP1B1Q10567 949 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 PRKD1Q15139 912 aaPredicted RBP19.02■□□□□ 0.64
VPS33A-205ENST00000541169 HS1BP3Q53T59 392 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 ALG1LQ6GMV1 187 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 NEK5Q6P3R8 708 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 BRAT1Q6PJG6 821 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 HDDC3Q8N4P3 179 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 GRIN3AQ8TCU5 1115 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 RLN3Q8WXF3 142 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 SPOCK2Q92563 424 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 LGMNQ99538 433 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 SLC6A17Q9H1V8 727 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 RBM22Q9NW64 420 aaKnown RBP eCLIP19.02■□□□□ 0.64
VPS33A-205ENST00000541169 ZKSCAN5Q9Y2L8 839 aa19.02■□□□□ 0.64
VPS33A-205ENST00000541169 SHROOM3Q8TF72 1996 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 KCNK3O14649 394 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 SOCS5O75159 536 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 STK10O94804 968 aaKnown RBP19.01■□□□□ 0.63
VPS33A-205ENST00000541169 CTSLP07711 333 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 HOXD12P35452 270 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 SCNN1BP51168 640 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 NEK3P51956 506 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 RPL6Q02878 288 aaKnown RBP19.01■□□□□ 0.63
VPS33A-205ENST00000541169 NOMO1Q15155 1222 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 PLK5Q496M5 336 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 ZNF569Q5MCW4 686 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 SYCP2LQ5T4T6 812 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 CFAP58Q5T655 872 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 ATXN7L2Q5T6C5 722 aaPredicted RBP19.01■□□□□ 0.63
VPS33A-205ENST00000541169 PMS2CLQ68D20 193 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 FBXL19Q6PCT2 694 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 ERN2Q76MJ5 926 aaKnown RBP19.01■□□□□ 0.63
VPS33A-205ENST00000541169 RABEPKQ7Z6M1 372 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 CDKL3Q8IVW4 592 aaPredicted RBP19.01■□□□□ 0.63
VPS33A-205ENST00000541169 CHST14Q8NCH0 376 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 ERLEC1Q96DZ1 483 aa19.01■□□□□ 0.63
VPS33A-205ENST00000541169 TOE1Q96GM8 510 aaKnown RBP19.01■□□□□ 0.63
VPS33A-205ENST00000541169 IL12RB2Q99665 862 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 216.8 ms