RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 SLC12A6Q9UHW9 1150 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 TRIP11Q15643 1979 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 CELSR2Q9HCU4 2923 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 CITO14578 2027 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 MYH10P35580 1976 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 C3orf70A6NLC5 250 aaPredicted RBP8.56□□□□□ -1.04
CHD4-208ENST00000540960 H7C0C1 242 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 K7EQS6 105 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 M0QYT0 321 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 PPP1R12AO14974 1030 aaPredicted RBP8.56□□□□□ -1.04
CHD4-208ENST00000540960 GJB6O95452 261 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 ABHD2P08910 425 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 MYBL2P10244 700 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 RBP3P10745 1247 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 ACAT1P24752 427 aaKnown RBP8.56□□□□□ -1.04
CHD4-208ENST00000540960 HSD17B3P37058 310 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 GGCXP38435 758 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 GRIK1P39086 918 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 BRCC3P46736 316 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 RPL21P46778 160 aaKnown RBP8.56□□□□□ -1.04
CHD4-208ENST00000540960 ATP5OP48047 213 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 TUFMP49411 452 aaKnown RBP8.56□□□□□ -1.04
CHD4-208ENST00000540960 ARSEP51690 589 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 HDAC4P56524 1084 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 ARL4CP56559 192 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 CBX1P83916 185 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 CDK16Q00536 496 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 OTUD4Q01804 1114 aaKnown RBP8.56□□□□□ -1.04
CHD4-208ENST00000540960 BNC1Q01954 994 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 DPYSL3Q14195 570 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 STAT4Q14765 748 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 PDK1Q15118 436 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 NOMO1Q15155 1222 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 OASLQ15646 514 aaKnown RBP8.56□□□□□ -1.04
CHD4-208ENST00000540960 CDO1Q16878 200 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 P3H1Q32P28 736 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 CTXN3Q4LDR2 81 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 ANKRD20A8PQ5CZ79 823 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 GPR158Q5T848 1215 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 SLC9A4Q6AI14 798 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 TAOK1Q7L7X3 1001 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 DEFB106AQ8N104 65 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 PDIK1LQ8N165 341 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 ELMOD1Q8N336 334 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 RIBC1Q8N443 379 aaPredicted RBP8.56□□□□□ -1.04
CHD4-208ENST00000540960 LZTR1Q8N653 840 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 ACTL9Q8TC94 416 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 RNF139Q8WU17 664 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 HMGB4Q8WW32 186 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 TRIM51Q9BSJ1 452 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 KLC2Q9H0B6 622 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 DHX35Q9H5Z1 703 aaKnown RBP8.56□□□□□ -1.04
CHD4-208ENST00000540960 GAREM1Q9H706 876 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 FAM204AQ9H8W3 233 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 CNOT10Q9H9A5 744 aaKnown RBP8.56□□□□□ -1.04
CHD4-208ENST00000540960 PCDH18Q9HCL0 1135 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 ZDHHC4Q9NPG8 344 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 MMP17Q9ULZ9 603 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 AP4E1Q9UPM8 1137 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 CCL26Q9Y258 94 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 PLAAQ9Y263 795 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 NEU2Q9Y3R4 380 aa8.56□□□□□ -1.04
CHD4-208ENST00000540960 OTOGQ6ZRI0 2925 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 DENND4CQ5VZ89 1909 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 TCRBV7S2A1N4TA0A589 114 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 DNALI1O14645 258 aaPredicted RBP8.55□□□□□ -1.04
CHD4-208ENST00000540960 TNFSF14O43557 240 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 ATP2C2O75185 946 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 TCEA3O75764 348 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 GRAP2O75791 330 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 GSTA2P09210 222 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 ELAVL4P26378 380 aaKnown RBP8.55□□□□□ -1.04
CHD4-208ENST00000540960 IL1R2P27930 398 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 ECHS1P30084 290 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 ADRA1BP35368 520 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 KCNJ1P48048 391 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 VAC14Q08AM6 782 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 GPS1Q13098 491 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 CBLBQ13191 982 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 IGFBP7Q16270 282 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 SMTNL2Q2TAL5 461 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 TBC1D25Q3MII6 688 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 DNAJC21Q5F1R6 531 aaKnown RBP8.55□□□□□ -1.04
CHD4-208ENST00000540960 KCNT1Q5JUK3 1230 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 CEP85LQ5SZL2 805 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 EMC10Q5UCC4 262 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 IZUMO3Q5VZ72 239 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 ARMC3Q5W041 872 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 BTBD8Q5XKL5 378 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 AADACL2Q6P093 401 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 PAQR9Q6ZVX9 377 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 RABEPKQ7Z6M1 372 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 NUP93Q8N1F7 819 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 ARFGAP1Q8N6T3 406 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 PLD5Q8N7P1 536 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 LEMD2Q8NC56 503 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 C3orf58Q8NDZ4 430 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 PDZD8Q8NEN9 1154 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 FBXO25Q8TCJ0 367 aa8.55□□□□□ -1.04
CHD4-208ENST00000540960 SNRNP27Q8WVK2 155 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms