RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 POP4O95707 220 aaKnown RBP9.37□□□□□ -0.91
SNHG1-215ENST00000540904 GSRP00390 522 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 UGT2B4P06133 528 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 IGHV4-34P06331 123 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 SERPINF2P08697 491 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 ENGP17813 658 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 COMTP21964 271 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 SERPINB6P35237 376 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 SLC1A1P43005 524 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 MAPK8P45983 427 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 IL10RBQ08334 325 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 CCDC15Q0P6D6 951 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 ODF2Q5BJF6 829 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 ANKRD20A8PQ5CZ79 823 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 PIP5KL1Q5T9C9 394 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 FBXL19Q6PCT2 694 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 SLC23A3Q6PIS1 610 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 ERN2Q76MJ5 926 aaKnown RBP9.37□□□□□ -0.91
SNHG1-215ENST00000540904 TSEN2Q8NCE0 465 aaKnown RBP9.37□□□□□ -0.91
SNHG1-215ENST00000540904 ACRBPQ8NEB7 543 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 PCDH19Q8TAB3 1148 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 NETO1Q8TDF5 533 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 FAM131CQ96AQ9 280 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 RMDN1Q96DB5 314 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 ZNF670Q9BS34 389 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 EDEM2Q9BV94 578 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 CINPQ9BW66 212 aaPredicted RBP9.37□□□□□ -0.91
SNHG1-215ENST00000540904 GTPBP2Q9BX10 602 aaKnown RBP9.37□□□□□ -0.91
SNHG1-215ENST00000540904 KDM4CQ9H3R0 1056 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 GOLPH3Q9H4A6 298 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 LHX3Q9UBR4 397 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 SLC6A14Q9UN76 642 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 REXO2Q9Y3B8 237 aaKnown RBP9.37□□□□□ -0.91
SNHG1-215ENST00000540904 SLCO1B1Q9Y6L6 691 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 THADAQ6YHU6 1953 aa9.37□□□□□ -0.91
SNHG1-215ENST00000540904 GVINP1Q7Z2Y8 2422 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 A0A0A6YYK5 440 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-215ENST00000540904 A0A1B0GTW7 788 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 MFSD11O43934 449 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 MAFKO60675 156 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 MAP3K6O95382 1288 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 KRT1P04264 644 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 ADRB3P13945 408 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 SDHBP21912 280 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 KDELR1P24390 212 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 ITGB7P26010 798 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 CD27P26842 260 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 MAT2AP31153 395 aaKnown RBP9.36□□□□□ -0.91
SNHG1-215ENST00000540904 ID4P47928 161 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 AFF3P51826 1226 aaKnown RBP9.36□□□□□ -0.91
SNHG1-215ENST00000540904 NEK3P51956 506 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 ATXN3P54252 364 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-215ENST00000540904 HADHBP55084 474 aaKnown RBP9.36□□□□□ -0.91
SNHG1-215ENST00000540904 NAP1L1P55209 391 aaKnown RBP9.36□□□□□ -0.91
SNHG1-215ENST00000540904 TAS2R38P59533 333 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 PPP2CBP62714 309 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 PPP2CAP67775 309 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 RAD51Q06609 339 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 RFTN1Q14699 578 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-215ENST00000540904 ZNF805Q5CZA5 627 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 STPG1Q5TH74 334 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 LRRC38Q5VT99 294 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 NCBP2-AS2Q69YL0 99 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 LAYNQ6UX15 382 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 GDPD4Q6W3E5 623 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 PARS2Q7L3T8 475 aaKnown RBP9.36□□□□□ -0.91
SNHG1-215ENST00000540904 DAAM2Q86T65 1068 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 KIAA1328Q86T90 577 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 TMEM139Q8IV31 216 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 RHOT1Q8IXI2 618 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 ATPAF2Q8N5M1 289 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 LRIG1Q96JA1 1093 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 KLHL32Q96NJ5 620 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 DESI2Q9BSY9 194 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 OSBPL1AQ9BXW6 950 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 MAK16Q9BXY0 300 aaKnown RBP9.36□□□□□ -0.91
SNHG1-215ENST00000540904 HDAC8Q9BY41 377 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 LACRTQ9GZZ8 138 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 EBF2Q9HAK2 575 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 CAPN10Q9HC96 672 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 TM9SF3Q9HD45 589 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 SALL4Q9UJQ4 1053 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 ALG6Q9Y672 507 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 DUSP10Q9Y6W6 482 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 PLXND1Q9Y4D7 1925 aa9.36□□□□□ -0.91
SNHG1-215ENST00000540904 CFAP54Q96N23 3096 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 A0A1B0GVT2 93 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 A0A1W2PPC4 97 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 C3orf70A6NLC5 250 aaPredicted RBP9.35□□□□□ -0.91
SNHG1-215ENST00000540904 C16orf96A6NNT2 1141 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 C4orf47A7E2U8 309 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 ARHGAP33O14559 1287 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 CDX4O14627 284 aaPredicted RBP9.35□□□□□ -0.91
SNHG1-215ENST00000540904 INSIG1O15503 277 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 RNGTTO60942 597 aaKnown RBP9.35□□□□□ -0.91
SNHG1-215ENST00000540904 PCDH8O95206 1070 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 PIGNO95427 931 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 SYPP08247 313 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 PYGBP11216 843 aa9.35□□□□□ -0.91
SNHG1-215ENST00000540904 RGRP47804 291 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms