RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 TBC1D3DA0A087WVF3 549 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 TBC1D3IA0A087WXS9 549 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 TBC1D3EA0A087X179 549 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 TBC1D3KA0A087X1G2 549 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 TBC1D3FA6NER0 549 aaPredicted RBP17.15■□□□□ 0.34
CD9-209ENST00000540891 TBC1D3LB9A6J9 549 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 ARHGAP33O14559 1287 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 LATO43561 262 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 POP4O95707 220 aaKnown RBP17.15■□□□□ 0.34
CD9-209ENST00000540891 TBC1D3HP0C7X1 549 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 ITGB7P26010 798 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 CDC25BP30305 580 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 MAPK8P45983 427 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 RHOAP61586 193 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 TBC1D3GQ6DHY5 549 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 TBC1D3CQ6IPX1 549 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 TBC1D3Q8IZP1 549 aaPredicted RBP17.15■□□□□ 0.34
CD9-209ENST00000540891 OR2I1PQ8NGU4 316 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 PCDH19Q8TAB3 1148 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 FAF2Q96CS3 445 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 LRIG1Q96JA1 1093 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 EXOC2Q96KP1 924 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 GDAP1L1Q96MZ0 367 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 TMEM9BQ9NQ34 198 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 IPO11Q9UI26 975 aaKnown RBP17.15■□□□□ 0.34
CD9-209ENST00000540891 PCDHA13Q9Y5I0 950 aa17.15■□□□□ 0.34
CD9-209ENST00000540891 PLXNA2O75051 1894 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 SPTBN4Q9H254 2564 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 ADAMTS9Q9P2N4 1935 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 DCDC2BA2VCK2 349 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 KRIT1O00522 736 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 WNT9AO14904 365 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 INSIG1O15503 277 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 NDUFA10O95299 355 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 IGSF6O95976 241 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 PEX11BO96011 259 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 KRT7P08729 469 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 CYLC1P35663 651 aaPredicted RBP17.14■□□□□ 0.33
CD9-209ENST00000540891 RGRP47804 291 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 CSNK1EP49674 416 aaKnown RBP17.14■□□□□ 0.33
CD9-209ENST00000540891 NEK3P51956 506 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 HADHBP55084 474 aaKnown RBP17.14■□□□□ 0.33
CD9-209ENST00000540891 IL10RBQ08334 325 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 GRIK2Q13002 908 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 PDK2Q15119 407 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 NCBP2-AS2Q69YL0 99 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 LAYNQ6UX15 382 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 RAD9BQ6WBX8 426 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 TRIM69Q86WT6 500 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 TMTC1Q8IUR5 882 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 TMEM139Q8IV31 216 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 RAPGEF5Q92565 580 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 PPP1R16AQ96I34 528 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 SLC6A18Q96N87 628 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 ZNF670Q9BS34 389 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 GTPBP2Q9BX10 602 aaKnown RBP17.14■□□□□ 0.33
CD9-209ENST00000540891 SP110Q9HB58 689 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 PREBQ9HCU5 417 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 DYRK4Q9NR20 520 aa17.14■□□□□ 0.33
CD9-209ENST00000540891 REXO2Q9Y3B8 237 aaKnown RBP17.14■□□□□ 0.33
CD9-209ENST00000540891 EPN1Q9Y6I3 576 aaPredicted RBP17.14■□□□□ 0.33
CD9-209ENST00000540891 A0A1B0GVT2 93 aa17.13■□□□□ 0.33
CD9-209ENST00000540891 UGT2B4P06133 528 aa17.13■□□□□ 0.33
CD9-209ENST00000540891 ADRB3P13945 408 aa17.13■□□□□ 0.33
CD9-209ENST00000540891 ABL2P42684 1182 aa17.13■□□□□ 0.33
CD9-209ENST00000540891 ANKRD20A8PQ5CZ79 823 aa17.13■□□□□ 0.33
CD9-209ENST00000540891 ZNF805Q5CZA5 627 aa17.13■□□□□ 0.33
CD9-209ENST00000540891 MINDY1Q8N5J2 469 aa17.13■□□□□ 0.33
CD9-209ENST00000540891 PQLC3Q8N755 202 aa17.13■□□□□ 0.33
CD9-209ENST00000540891 KCTD6Q8NC69 237 aa17.13■□□□□ 0.33
CD9-209ENST00000540891 TSEN2Q8NCE0 465 aaKnown RBP17.13■□□□□ 0.33
CD9-209ENST00000540891 CALN1Q9BXU9 219 aa17.13■□□□□ 0.33
CD9-209ENST00000540891 SALL4Q9UJQ4 1053 aa17.13■□□□□ 0.33
CD9-209ENST00000540891 HYOU1Q9Y4L1 999 aa17.13■□□□□ 0.33
CD9-209ENST00000540891 CACNA1EQ15878 2313 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 RCCD1A6NED2 376 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 C16orf96A6NNT2 1141 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 MUSKO15146 869 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 SPINT1O43278 529 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 MFSD11O43934 449 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 BUB1BO60566 1050 aaPredicted RBP17.12■□□□□ 0.33
CD9-209ENST00000540891 MAFKO60675 156 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 RNGTTO60942 597 aaKnown RBP17.12■□□□□ 0.33
CD9-209ENST00000540891 GJB3O75712 270 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 PALMO75781 387 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 WNT1P04628 370 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 SYPP08247 313 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 COMTP21964 271 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 KDELR1P24390 212 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 MAT2AP31153 395 aaKnown RBP17.12■□□□□ 0.33
CD9-209ENST00000540891 GRIA4P48058 902 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 AFF3P51826 1226 aaKnown RBP17.12■□□□□ 0.33
CD9-209ENST00000540891 RACK1P63244 317 aaKnown RBP17.12■□□□□ 0.33
CD9-209ENST00000540891 SLC10A7Q0GE19 358 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 CCDC15Q0P6D6 951 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 RFTN1Q14699 578 aaPredicted RBP17.12■□□□□ 0.33
CD9-209ENST00000540891 PAFAH1B3Q15102 231 aaKnown RBP17.12■□□□□ 0.33
CD9-209ENST00000540891 SPA17Q15506 151 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 GDPD4Q6W3E5 623 aa17.12■□□□□ 0.33
CD9-209ENST00000540891 SPC24Q8NBT2 197 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms