RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	PDLIM1	O00151	329 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NCAM2	O15394	837 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZBTB14	O43829	449 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KRT38	O76015	456 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	F9	P00740	461 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	EDN1	P05305	212 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	C8A	P07357	584 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RPL10	P27635	214 aa	Known RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	HARS2	P49590	506 aa	Known RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CDH8	P55286	799 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NRF1	Q16656	503 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	C15orf59	Q2T9L4	293 aa	Predicted RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SDE2	Q6IQ49	451 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	LRRC8B	Q6P9F7	803 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CES3	Q6UWW8	571 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MTSS1L	Q765P7	747 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ADGRG6	Q86SQ4	1221 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ACOT1	Q86TX2	421 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZDHHC17	Q8IUH5	632 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PQLC1	Q8N2U9	271 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FBXW8	Q8N3Y1	598 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DEFB123	Q8N688	67 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SMG8	Q8ND04	991 aa	Known RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FAM156A	Q8NDB6	213 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TMEM174	Q8WUU8	243 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	LRGUK	Q96M69	825 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	C1orf21	Q9H246	121 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TUBGCP4	Q9UGJ1	667 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF510	Q9Y2H8	683 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	LINC01553	A4QN01	128 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	APOC4-APOC2	K7ER74	178 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ATP9B	O43861	1147 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KLHL2	O95198	593 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	APOC2	P02655	101 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KRT7	P08729	469 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FGF3	P11487	239 aa	Predicted RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SDC4	P31431	198 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	STT3A	P46977	705 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NRIP1	P48552	1158 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SLC11A2	P49281	568 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NUDT2	P50583	147 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NDST1	P52848	882 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	HDAC4	P56524	1084 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PPID	Q08752	370 aa	Known RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ITGA9	Q13797	1035 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CYLC2	Q14093	348 aa	Predicted RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TMEM259	Q4ZIN3	620 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	INTS6L	Q5JSJ4	861 aa	Known RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SH2D4B	Q5SQS7	431 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	UBXN11	Q5T124	520 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RBM23	Q86U06	439 aa	Known RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZBTB46	Q86UZ6	589 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RAB3IL1	Q8TBN0	382 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ACTRT2	Q8TDY3	377 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GAB3	Q8WWW8	586 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MARK4	Q96L34	752 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	HSFY1	Q96LI6	401 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	LENG8	Q96PV6	779 aa	Predicted RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PEBP4	Q96S96	227 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CPXM1	Q96SM3	734 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CDRT15	Q96T59	188 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MAGEB5	Q9BZ81	275 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SEMA6A	Q9H2E6	1030 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	WDR55	Q9H6Y2	383 aa	Predicted RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ASNSD1	Q9NWL6	643 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GDAP2	Q9NXN4	497 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FNIP2	Q9P278	1114 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TIMM13	Q9Y5L4	95 aa	Predicted RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	THSD7B	Q9C0I4	1608 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GSR	P00390	522 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	IL1B	P01584	269 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TFPT	P0C1Z6	253 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MBL2	P11226	248 aa	Predicted RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	COX4I1	P13073	169 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	XRCC1	P18887	633 aa	Predicted RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PROZ	P22891	400 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PGGT1B	P53609	377 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	AMHR2	Q16671	573 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MBLAC2	Q68D91	279 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KLHL35	Q6PF15	583 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF598	Q86UK7	904 aa	Known RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KBTBD6	Q86V97	674 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RBM12B	Q8IXT5	1001 aa	Known RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF513	Q8N8E2	541 aa	Predicted RBP	5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	B3GALNT2	Q8NCR0	500 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CATSPER2	Q96P56	530 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CASD1	Q96PB1	797 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RNF39	Q9H2S5	420 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MFSD1	Q9H3U5	465 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PRDM12	Q9H4Q4	367 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ANLN	Q9NQW6	1124 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FAM49B	Q9NUQ9	324 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CD207	Q9UJ71	328 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	EMCN	Q9ULC0	261 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	USP18	Q9UMW8	372 aa		5.75	□□□□□ -1.49
RAPGEF4-215	ENST00000540783		H3BNC9	293 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TPP1	O14773	563 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TRMU	O75648	421 aa	Known RBP	5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	METTL18	O95568	372 aa		5.74	□□□□□ -1.49

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