RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 POLR2LP62875 67 aaKnown RBP10.56□□□□□ -0.72
CDCA3-208ENST00000540683 ARF5P84085 180 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 E2F1Q01094 437 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 RFTN1Q14699 578 aaPredicted RBP10.56□□□□□ -0.72
CDCA3-208ENST00000540683 TSR1Q2NL82 804 aaKnown RBP10.56□□□□□ -0.72
CDCA3-208ENST00000540683 MYLK3Q32MK0 819 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 ERMARDQ5T6L9 678 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 PLEKHA7Q6IQ23 1121 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 TRNP1Q6NT89 227 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 TMPRSS7Q7RTY8 843 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 APTXQ7Z2E3 356 aaKnown RBP10.56□□□□□ -0.72
CDCA3-208ENST00000540683 TMPRSS12Q86WS5 348 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 DNAAF5Q86Y56 855 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 BBS5Q8N3I7 341 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 CCDC185Q8N715 623 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 ATL2Q8NHH9 583 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 SAP25Q8TEE9 199 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 BTN2A2Q8WVV5 523 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 ZCCHC14Q8WYQ9 949 aaKnown RBP10.56□□□□□ -0.72
CDCA3-208ENST00000540683 CAMK1GQ96NX5 476 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 LENG8Q96PV6 779 aaPredicted RBP10.56□□□□□ -0.72
CDCA3-208ENST00000540683 TUBGCP5Q96RT8 1024 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 SLC17A9Q9BYT1 436 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 CPEB1Q9BZB8 566 aaKnown RBP10.56□□□□□ -0.72
CDCA3-208ENST00000540683 TTYH3Q9C0H2 523 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 TNKS2Q9H2K2 1166 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 ANLNQ9NQW6 1124 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 KLHL11Q9NVR0 708 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 ARHGAP20Q9P2F6 1191 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 DKK3Q9UBP4 350 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 UBA2Q9UBT2 640 aaPredicted RBP10.56□□□□□ -0.72
CDCA3-208ENST00000540683 IPO11Q9UI26 975 aaKnown RBP10.56□□□□□ -0.72
CDCA3-208ENST00000540683 FZD10Q9ULW2 581 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 MFHAS1Q9Y4C4 1052 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.56□□□□□ -0.72
CDCA3-208ENST00000540683 KNL1Q8NG31 2342 aa10.56□□□□□ -0.72
CDCA3-208ENST00000540683 MAP1BP46821 2468 aaKnown RBP10.56□□□□□ -0.72
CDCA3-208ENST00000540683 TMEM110-MUSTN1A8MSY1 372 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 I6L893 689 aaPredicted RBP10.55□□□□□ -0.72
CDCA3-208ENST00000540683 K7ERQ8 282 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 EEF2KO00418 725 aaKnown RBP10.55□□□□□ -0.72
CDCA3-208ENST00000540683 ENC1O14682 589 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 SLC31A1O15431 190 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 SMAD6O43541 496 aaKnown RBP10.55□□□□□ -0.72
CDCA3-208ENST00000540683 RFPL3O75679 317 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 DKK1O94907 266 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 FTLP02792 175 aaPredicted RBP10.55□□□□□ -0.72
CDCA3-208ENST00000540683 KRT10P13645 584 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 SERPINB6P35237 376 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 PCK1P35558 622 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 ARL4AP40617 200 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 UBASH3AP57075 661 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 RHOAP61586 193 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 YPEL5P62699 121 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 PPP2CBP62714 309 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 PPP2CAP67775 309 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 MAMLD1Q13495 774 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 SERINC3Q13530 473 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 TRIM14Q14142 442 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 PIGHQ14442 188 aaPredicted RBP10.55□□□□□ -0.72
CDCA3-208ENST00000540683 ZNF284Q2VY69 593 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 POM121L1PQ3SYA9 428 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 BOLA3Q53S33 107 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 TDRD12Q587J7 1177 aaKnown RBP10.55□□□□□ -0.72
CDCA3-208ENST00000540683 ERAP2Q6P179 960 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 BRAT1Q6PJG6 821 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 GDPD4Q6W3E5 623 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 KYAT3Q6YP21 454 aaKnown RBP10.55□□□□□ -0.72
CDCA3-208ENST00000540683 CCNI2Q6ZMN8 369 aaPredicted RBP10.55□□□□□ -0.72
CDCA3-208ENST00000540683 TTC7BQ86TV6 843 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 LRRC49Q8IUZ0 686 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 CHCHD4Q8N4Q1 142 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 PAF1Q8N7H5 531 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 PDCD7Q8N8D1 485 aaKnown RBP10.55□□□□□ -0.72
CDCA3-208ENST00000540683 TMEM145Q8NBT3 493 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 CXorf40AQ8TE69 158 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 NSMCE1Q8WV22 266 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 BAP1Q92560 729 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 GATA6Q92908 595 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 GLMNQ92990 594 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 CNDP2Q96KP4 475 aaKnown RBP10.55□□□□□ -0.72
CDCA3-208ENST00000540683 ZNF641Q96N77 438 aaPredicted RBP10.55□□□□□ -0.72
CDCA3-208ENST00000540683 HSD3B7Q9H2F3 369 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 HAUS4Q9H6D7 363 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 CCDC86Q9H6F5 360 aaKnown RBP10.55□□□□□ -0.72
CDCA3-208ENST00000540683 KCTD5Q9NXV2 234 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 AP4E1Q9UPM8 1137 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 SNX10Q9Y5X0 201 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 WASF2Q9Y6W5 498 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 PLXNA2O75051 1894 aa10.55□□□□□ -0.72
CDCA3-208ENST00000540683 CHD5Q8TDI0 1954 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 TCRBV5S1A1TA0A578 114 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 TMEM191CA6NGB0 347 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 C16orf96A6NNT2 1141 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 RASA4BC9J798 803 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 H3BRJ5 948 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 RASA4O43374 803 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 CBFA2T2O43439 604 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 TMCC1O94876 653 aa10.54□□□□□ -0.72
CDCA3-208ENST00000540683 SERPING1P05155 500 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms