RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 LRRTM3Q86VH5 581 aa14.3□□□□□ -0.12
INO80E-203ENST00000540562 DQX1Q8TE96 717 aaKnown RBP14.3□□□□□ -0.12
INO80E-203ENST00000540562 SREK1Q8WXA9 508 aaKnown RBP14.3□□□□□ -0.12
INO80E-203ENST00000540562 PPWD1Q96BP3 646 aaKnown RBP14.3□□□□□ -0.12
INO80E-203ENST00000540562 TEKT5Q96M29 485 aa14.3□□□□□ -0.12
INO80E-203ENST00000540562 ANKRD27Q96NW4 1050 aa14.3□□□□□ -0.12
INO80E-203ENST00000540562 SLC39A8Q9C0K1 460 aa14.3□□□□□ -0.12
INO80E-203ENST00000540562 NT5MQ9NPB1 228 aa14.3□□□□□ -0.12
INO80E-203ENST00000540562 ACTL7AQ9Y615 435 aa14.3□□□□□ -0.12
INO80E-203ENST00000540562 COPG1Q9Y678 874 aaKnown RBP14.3□□□□□ -0.12
INO80E-203ENST00000540562 BRCA1P38398 1863 aaKnown RBP14.29□□□□□ -0.12
INO80E-203ENST00000540562 PRSS56P0CW18 603 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 CES1P23141 567 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 PSEN2P49810 448 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 PDZD4Q76G19 769 aaPredicted RBP14.29□□□□□ -0.12
INO80E-203ENST00000540562 C14orf80Q86SX3 495 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 ZBTB46Q86UZ6 589 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 ST13P4Q8IZP2 240 aaPredicted RBP14.29□□□□□ -0.12
INO80E-203ENST00000540562 LILRA2Q8N149 483 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 KLHL32Q96NJ5 620 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 PTPN18Q99952 460 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 PKP2Q99959 881 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 CASS4Q9NQ75 786 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 ABI2Q9NYB9 513 aaPredicted RBP14.29□□□□□ -0.12
INO80E-203ENST00000540562 UBAP1Q9NZ09 502 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 MATN2O00339 956 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 HLA-DQB2P05538 268 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 STMN1P16949 149 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 GRIK1P39086 918 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 CASP2P42575 452 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 PDAP1Q13442 181 aaKnown RBP14.29□□□□□ -0.12
INO80E-203ENST00000540562 AP1ARQ63HQ0 302 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 GRIN3AQ8TCU5 1115 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 SMIM14Q96QK8 99 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 NAT9Q9BTE0 207 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 HEMK1Q9Y5R4 338 aaPredicted RBP14.29□□□□□ -0.12
INO80E-203ENST00000540562 UNC80Q8N2C7 3258 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 OTOFQ9HC10 1997 aa14.29□□□□□ -0.12
INO80E-203ENST00000540562 XPOTO43592 962 aaKnown RBP14.28□□□□□ -0.12
INO80E-203ENST00000540562 TIMM44O43615 452 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 CCNT2O60583 730 aaKnown RBP14.28□□□□□ -0.12
INO80E-203ENST00000540562 PAGE1O75459 146 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 THP07101 528 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 UQCRBP14927 111 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 UGT1A6P19224 532 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 MTTPP55157 894 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 PRAMEP78395 509 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 PLIN5Q00G26 463 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 PRPSAP1Q14558 356 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 TBCCQ15814 346 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 AGKQ53H12 422 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 LIPMQ5VYY2 423 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 SCIMPQ6UWF3 145 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 TRIM67Q6ZTA4 783 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 IFNEQ86WN2 208 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 LSMEM2Q8N112 164 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 FCRL2Q96LA5 508 aaPredicted RBP14.28□□□□□ -0.12
INO80E-203ENST00000540562 TBL1YQ9BQ87 522 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 ALG9Q9H6U8 611 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 GDAP2Q9NXN4 497 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 ARL5CA6NH57 179 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 NCF1BA6NI72 391 aaPredicted RBP14.28□□□□□ -0.12
INO80E-203ENST00000540562 NCF1CA8MVU1 366 aaPredicted RBP14.28□□□□□ -0.12
INO80E-203ENST00000540562 MT-ND1P03886 318 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 CCDC166P0CW27 439 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 NCF1P14598 390 aaPredicted RBP14.28□□□□□ -0.12
INO80E-203ENST00000540562 ARL1P40616 181 aaPredicted RBP14.28□□□□□ -0.12
INO80E-203ENST00000540562 PLA2G4EQ3MJ16 856 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 LIN52Q52LA3 116 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 PGM2L1Q6PCE3 622 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 PLEKHH3Q7Z736 793 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 PQLC1Q8N2U9 271 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 RAB3IL1Q8TBN0 382 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 ESAMQ96AP7 390 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 OLFM1Q99784 485 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 IL22Q9GZX6 179 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 C1orf21Q9H246 121 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 FAM149AA5PLN7 773 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 SEC24DO94855 1032 aaPredicted RBP14.28□□□□□ -0.12
INO80E-203ENST00000540562 SUPT7LO94864 414 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 SIX3O95343 332 aaPredicted RBP14.28□□□□□ -0.12
INO80E-203ENST00000540562 ARNTP27540 789 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 PNPLA4P41247 253 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 C1QTNF8P60827 252 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 CDKL1Q00532 357 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 PTK2BQ14289 1009 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 DDR2Q16832 855 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 GNASQ5JWF2 1037 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 TSTD2Q5T7W7 516 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 ITPRIPL1Q6GPH6 555 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 NAPEPLDQ6IQ20 393 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 CASP10Q92851 521 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 LRCH3Q96II8 777 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 SNX13Q9Y5W8 968 aa14.28□□□□□ -0.12
INO80E-203ENST00000540562 USP34Q70CQ2 3546 aa14.27□□□□□ -0.12
INO80E-203ENST00000540562 RRN3P2A6NIE6 340 aa14.27□□□□□ -0.12
INO80E-203ENST00000540562 J3KR12 359 aa14.27□□□□□ -0.12
INO80E-203ENST00000540562 DDHD2O94830 711 aa14.27□□□□□ -0.12
INO80E-203ENST00000540562 FESP07332 822 aa14.27□□□□□ -0.12
INO80E-203ENST00000540562 CHRM3P20309 590 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms