RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 KLC1Q07866 573 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 CCNIQ14094 377 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 ZNF789Q5FWF6 425 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 FAM26DQ5JW98 314 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 LPCAT4Q643R3 524 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 PKN3Q6P5Z2 889 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 SCD5Q86SK9 330 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 RNF135Q8IUD6 432 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 CCNYL1Q8N7R7 359 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 NDNQ99608 321 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 GPR22Q99680 433 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 PPP1R12CQ9BZL4 782 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 TRPV6Q9H1D0 765 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 OSBPL2Q9H1P3 480 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 ARHGEF38Q9NXL2 777 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 XPR1Q9UBH6 696 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 CDH22Q9UJ99 828 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 ANGPTL2Q9UKU9 493 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 DSEQ9UL01 958 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 CDY1Q9Y6F8 540 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 A0A1W2PQH9 124 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 CST5P28325 142 aaPredicted RBP11.67□□□□□ -0.54
C11orf54-214ENST00000540113 PEX19P40855 299 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 SLC1A2P43004 574 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 PAPOLAP51003 745 aaKnown RBP11.67□□□□□ -0.54
C11orf54-214ENST00000540113 ATXN3P54252 364 aaPredicted RBP11.67□□□□□ -0.54
C11orf54-214ENST00000540113 CSE1LP55060 971 aaKnown RBP11.67□□□□□ -0.54
C11orf54-214ENST00000540113 AP2B1P63010 937 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 TBL3Q12788 808 aaKnown RBP11.67□□□□□ -0.54
C11orf54-214ENST00000540113 PDCD2Q16342 344 aaPredicted RBP11.67□□□□□ -0.54
C11orf54-214ENST00000540113 LSM12Q3MHD2 195 aaKnown RBP11.67□□□□□ -0.54
C11orf54-214ENST00000540113 PCID2Q5JVF3 399 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 NXNQ6DKJ4 435 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 RTN4RL1Q86UN2 441 aaPredicted RBP11.67□□□□□ -0.54
C11orf54-214ENST00000540113 ZNF280BQ86YH2 543 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 ELMO2Q96JJ3 720 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 CATSPER2Q96P56 530 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 KLHL5Q96PQ7 755 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 VAT1Q99536 393 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 ZNF184Q99676 751 aaPredicted RBP11.67□□□□□ -0.54
C11orf54-214ENST00000540113 RHOJQ9H4E5 214 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 STN1Q9H668 368 aaKnown RBP11.67□□□□□ -0.54
C11orf54-214ENST00000540113 TCF7L2Q9NQB0 619 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 NDE1Q9NXR1 346 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 ABI2Q9NYB9 513 aaPredicted RBP11.67□□□□□ -0.54
C11orf54-214ENST00000540113 CORO1CQ9ULV4 474 aaPredicted RBP11.67□□□□□ -0.54
C11orf54-214ENST00000540113 SORCS3Q9UPU3 1222 aa11.67□□□□□ -0.54
C11orf54-214ENST00000540113 MTF2Q9Y483 593 aaPredicted RBP11.67□□□□□ -0.54
C11orf54-214ENST00000540113 FNDC1Q4ZHG4 1894 aaPredicted RBP11.67□□□□□ -0.54
C11orf54-214ENST00000540113 FAM95CA0A1B0GW59 222 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 INPPL1O15357 1258 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 DLX3O60479 287 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 DDHD2O94830 711 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 SKIP12755 728 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 CCNCP24863 283 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 ZNF135P52742 658 aaPredicted RBP11.66□□□□□ -0.54
C11orf54-214ENST00000540113 ITKQ08881 620 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 DDR2Q16832 855 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 DEFB115Q30KQ5 88 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 SLC39A12Q504Y0 691 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 RBM20Q5T481 1227 aaKnown RBP11.66□□□□□ -0.54
C11orf54-214ENST00000540113 MANEALQ5VSG8 457 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 ZNF470Q6ECI4 717 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 ZYG11AQ6WRX3 759 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 TMC7Q7Z402 723 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 LDB1Q86U70 411 aaPredicted RBP11.66□□□□□ -0.54
C11orf54-214ENST00000540113 SPATA2LQ8IUW3 424 aaPredicted RBP11.66□□□□□ -0.54
C11orf54-214ENST00000540113 LSMEM2Q8N112 164 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 RNF148Q8N7C7 305 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 PHC3Q8NDX5 983 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 LINC01599Q8WXQ3 324 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 UROC1Q96N76 676 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 FSD1LQ9BXM9 530 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 ILKAPQ9H0C8 392 aaPredicted RBP11.66□□□□□ -0.54
C11orf54-214ENST00000540113 S100A14Q9HCY8 104 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 DONSONQ9NYP3 566 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 SSX2IPQ9Y2D8 614 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 LRCH1Q9Y2L9 728 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 HS3ST4Q9Y661 456 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 GRID2O43424 1007 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 GJB3O75712 270 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 ZNF189O75820 626 aaPredicted RBP11.66□□□□□ -0.54
C11orf54-214ENST00000540113 ATP5BP06576 529 aaKnown RBP11.66□□□□□ -0.54
C11orf54-214ENST00000540113 TYMPP19971 482 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 GRK4P32298 578 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 ARCN1P48444 511 aaKnown RBP11.66□□□□□ -0.54
C11orf54-214ENST00000540113 PSEN1P49768 467 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 MBTPS1Q14703 1052 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 CLLU1OSQ5K130 101 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 TSTD2Q5T7W7 516 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 LRRC8EQ6NSJ5 796 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 CNSTQ6PJW8 725 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 TRAF7Q6Q0C0 670 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 BEND5Q7L4P6 421 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 LINC00523Q86TU6 105 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 SNX32Q86XE0 403 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 CMTM5Q96DZ9 223 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 MRGPRX2Q96LB1 330 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 TSGA13Q96PP4 275 aa11.66□□□□□ -0.54
C11orf54-214ENST00000540113 SMOC2Q9H3U7 446 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms