RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 RPL10LQ96L21 214 aaKnown RBP14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 OSBPL11Q9BXB4 747 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 TRIM8Q9BZR9 551 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 CASS4Q9NQ75 786 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 PIGVQ9NUD9 493 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 THEGQ9P2T0 379 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 CLEC11AQ9Y240 323 aa14.1□□□□□ -0.15
SCNN1A-215ENST00000540037 M0QYT0 321 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 EEF2KO00418 725 aaKnown RBP14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 CLDN5O00501 218 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 GAS2O43903 313 aaKnown RBP14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 BEST1O76090 585 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 C8BP07358 591 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 INSRRP14616 1297 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 ERCC2P18074 760 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 KCNA5P22460 613 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 LRP8Q14114 963 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 RFTN1Q14699 578 aaPredicted RBP14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 NHSL2Q5HYW2 709 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 SULF1Q8IWU6 871 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 MICALL2Q8IY33 904 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 ZNF786Q8N393 782 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 BBS5Q8N3I7 341 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 C12orf43Q96C57 262 aaKnown RBP14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 ISOC1Q96CN7 298 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 C12orf42Q96LP6 360 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 GPR22Q99680 433 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 IL1RL2Q9HB29 575 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 CNOT11Q9UKZ1 510 aaKnown RBP14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 CEP350Q5VT06 3117 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 CITO14578 2027 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 C9JVG2 144 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 SOCS7O14512 581 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 H2AFYO75367 372 aaKnown RBP14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 DPEP1P16444 411 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 SOX11P35716 441 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 MATKP42679 507 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 CCR3P51677 355 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 SLC5A3P53794 718 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 NME5P56597 212 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 NAA20P61599 178 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 HERC3Q15034 1050 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 RNF135Q8IUD6 432 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 USP33Q8TEY7 942 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 SLC45A3Q96JT2 553 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 SPON1Q9HCB6 807 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 FBRSL1Q9HCM7 1045 aaKnown RBP14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 PNPLA3Q9NST1 481 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 SNTG2Q9NY99 539 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 DOLKQ9UPQ8 538 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 TRIM24O15164 1050 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 AKAP10O43572 662 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 ATE1O95260 518 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 YWHAQP27348 245 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 GRIA3P42263 894 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 CSRP3P50461 194 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 MAPK10P53779 464 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 PRKCQQ04759 706 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 BST2Q10589 180 aaKnown RBP14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 KCTD11Q693B1 232 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 OTOP3Q7RTS5 596 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 ALDH16A1Q8IZ83 802 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 CHST13Q8NET6 341 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 SPPL2BQ8TCT7 592 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 GPR78Q96P69 363 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 NAA50Q9GZZ1 169 aaKnown RBP14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 MUC3BQ9H195 1237 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 POMKQ9H5K3 350 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 SETD4Q9NVD3 440 aa14.09□□□□□ -0.15
SCNN1A-215ENST00000540037 MCM3APO60318 1980 aa14.08□□□□□ -0.15
SCNN1A-215ENST00000540037 AURKAO14965 403 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 DCLK1O15075 740 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 CYP2B6P20813 491 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 CD247P20963 164 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 TNFAIP2Q03169 654 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 DPYSQ14117 519 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 FASTKQ14296 549 aaKnown RBP14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 ADRM1Q16186 407 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 SLC25A52Q3SY17 297 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 KCTD21Q4G0X4 260 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 CHST15Q7LFX5 561 aaPredicted RBP14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 KDELC2Q7Z4H8 507 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 PELI3Q8N2H9 469 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 LZTR1Q8N653 840 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 SMYD1Q8NB12 490 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 SPATA22Q8NHS9 363 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 LZICQ8WZA0 190 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 CLK4Q9HAZ1 481 aaKnown RBP14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 SMOXQ9NWM0 555 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 SUCOQ9UBS9 1254 aaKnown RBP14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 DOCK1Q14185 1865 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 HEATR9A2RTY3 570 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 DLGAP1O14490 977 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 SETSIPP0DME0 302 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 ATP6V1B2P21281 511 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 POU6F1Q14863 301 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 FASTKD5Q7L8L6 764 aaKnown RBP14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 STRADAQ7RTN6 431 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 PLPPR4Q7Z2D5 763 aa14.08□□□□□ -0.16
SCNN1A-215ENST00000540037 PIGZQ86VD9 579 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms