RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 ASNSD1Q9NWL6 643 aa11.85□□□□□ -0.51
CLSTN3-209ENST00000539982 SEPT10Q9P0V9 454 aa11.85□□□□□ -0.51
CLSTN3-209ENST00000539982 DOPEY2Q9Y3R5 2298 aa11.85□□□□□ -0.51
CLSTN3-209ENST00000539982 A0A0D9SEW6 157 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 HSF2BPO75031 334 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 PPFIA2O75334 1257 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 ZNF202O95125 648 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 LETM1O95202 739 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 KRT5P13647 590 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 TSHRP16473 764 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 GGCXP38435 758 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 THOP1P52888 689 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 LRRC63Q05C16 580 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 C1QBPQ07021 282 aaKnown RBP11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 SLC20A2Q08357 652 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 NME3Q13232 169 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 UBAP2LQ14157 1087 aaKnown RBP11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 CARD16Q5EG05 197 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 FAXCQ5TGI0 409 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 ZNF658Q5TYW1 1059 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 RETSATQ6NUM9 610 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 PHACTR4Q8IZ21 702 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 ZSCAN1Q8NBB4 408 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 EHBP1Q8NDI1 1231 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 DENND6BQ8NEG7 585 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 RAB7BQ96AH8 199 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 CENPTQ96BT3 561 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 KREMEN1Q96MU8 473 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 GFM1Q96RP9 751 aaKnown RBP11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 LRRC61Q9BV99 259 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 SLC13A1Q9BZW2 595 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 CEP44Q9C0F1 390 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 CLPBQ9H078 707 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 SLC25A18Q9H1K4 315 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 RMND1Q9NWS8 449 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 GULP1Q9UBP9 304 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 PNMA8BQ9ULN7 279 aaPredicted RBP11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 TEX15Q9BXT5 2789 aa11.84□□□□□ -0.51
CLSTN3-209ENST00000539982 DRGXA6NNA5 263 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 M0QYT0 321 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 GRAP2O75791 330 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 JMJD7P0C870 316 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 HGFP14210 728 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 CCKBRP32239 447 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 NOS2P35228 1153 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 DNA2P51530 1060 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 YPEL5P62699 121 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 CCL7P80098 99 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 TLE1Q04724 770 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 PDCLQ13371 301 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 MANEAQ5SRI9 462 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 LVRNQ6Q4G3 990 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 PARS2Q7L3T8 475 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 ZNF683Q8IZ20 524 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 PCDH20Q8N6Y1 951 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 ARL10Q8N8L6 244 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 SCG3Q8WXD2 468 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 CCDC34Q96HJ3 373 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 PPP1R13BQ96KQ4 1090 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 TMEM74Q96NL1 305 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 FOXP3Q9BZS1 431 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 WDCPQ9H6R7 721 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 GEMIN8Q9NWZ8 242 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 RABGEF1Q9UJ41 708 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 PCDHGA4Q9Y5G9 962 aa11.83□□□□□ -0.52
CLSTN3-209ENST00000539982 A0A1W2PQ27 194 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 A0A1W2PQ64 194 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 A0A1W2PQM1 296 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 TRIM49BA6NDI0 452 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 D6RAR5 112 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 NEMP1O14524 444 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 TOR1BO14657 336 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 THAP12O43422 761 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 ZMPSTE24O75844 475 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 ADCY5O95622 1261 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 RPLP0P05388 317 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 GP1BBP13224 206 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 OR1E1P30953 314 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 EIF4A3P38919 411 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 SERPINH1P50454 418 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 CCNHP51946 323 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 PPARDQ03181 441 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 BRMS1LQ5PSV4 323 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 LRRC31Q6UY01 552 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 PLPP6Q8IY26 295 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 FSTL5Q8N475 847 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 WDTC1Q8N5D0 677 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 SNX21Q969T3 373 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 CCDC74AQ96AQ1 378 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 TMEM159Q96B96 161 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 C1orf74Q96LT6 269 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 CEP63Q96MT8 703 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 GSDMAQ96QA5 445 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 CPXM1Q96SM3 734 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 SPON2Q9BUD6 331 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 TKTL2Q9H0I9 626 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 GOLPH3LQ9H4A5 285 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 ANLNQ9NQW6 1124 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 ARHGEF38Q9NXL2 777 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 PISDQ9UG56 409 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms