RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 FAM102BQ5T8I3 360 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 TEDDM1Q5T9Z0 273 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 KAZNQ674X7 775 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 RNF111Q6ZNA4 994 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 RAPH1Q70E73 1250 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 BBS5Q8N3I7 341 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 ZSWIM2Q8NEG5 633 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 PPP4R1Q8TF05 950 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 ATP2A3Q93084 1043 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 PRR11Q96HE9 360 aaPredicted RBP7.79□□□□□ -1.16
CCDC60-204ENST00000539847 CNDP1Q96KN2 507 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 RIPOR3Q96MK2 946 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 RILPQ96NA2 401 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 PCYT2Q99447 389 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 CGRRF1Q99675 332 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 RUBCNLQ9H714 662 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 IFT122Q9HBG6 1241 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 XAB2Q9HCS7 855 aaKnown RBP7.79□□□□□ -1.16
CCDC60-204ENST00000539847 RGS18Q9NS28 235 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 TMEM161AQ9NX61 479 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 TUBA8Q9NY65 449 aaPredicted RBP7.79□□□□□ -1.16
CCDC60-204ENST00000539847 ARMCX1Q9P291 453 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 CDH22Q9UJ99 828 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 ADAMTS6Q9UKP5 1117 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 BARX2Q9UMQ3 279 aaPredicted RBP7.79□□□□□ -1.16
CCDC60-204ENST00000539847 WDR37Q9Y2I8 494 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 TTLL3Q9Y4R7 772 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 RPS6KL1Q9Y6S9 549 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 ATG2AQ2TAZ0 1938 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 LOXHD1Q8IVV2 1947 aa7.79□□□□□ -1.16
CCDC60-204ENST00000539847 EP300Q09472 2414 aaPredicted RBP7.79□□□□□ -1.16
CCDC60-204ENST00000539847 C15orf38-AP3S2A0A0A6YYH1 394 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 E5RJQ4 531 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 GOLGA8RI6L899 631 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 MED7O43513 233 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 HBP1O60381 514 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 CLASP2O75122 1294 aaKnown RBP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 SIN3BO75182 1162 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 GLRA3O75311 464 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 TRMUO75648 421 aaKnown RBP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 VNN1O95497 513 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 FAM58BPP0C7Q3 252 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 RBP3P10745 1247 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 CDK4P11802 303 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 TPSB2P20231 275 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 ALDH3B2P48448 385 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 CDK9P50750 372 aaKnown RBP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 PSMD7P51665 324 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 NUP107P57740 925 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 MYL6P60660 151 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 ACTR2P61160 394 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 YWHAGP61981 247 aaKnown RBP eCLIP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 RPL7AP62424 266 aaKnown RBP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 ROR1Q01973 937 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 DLG1Q12959 904 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 DPYSQ14117 519 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 FRG1Q14331 258 aaKnown RBP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 KRT81Q14533 505 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 EFTUD2Q15029 972 aaKnown RBP eCLIP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 PDK2Q15119 407 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 TPSAB1Q15661 275 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 ZFYVE27Q5T4F4 411 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 TDRD10Q5VZ19 366 aaKnown RBP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 STEAP4Q687X5 459 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 ANKRD54Q6NXT1 300 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 KLHDC10Q6PID8 442 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 TMEM270Q6UE05 265 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 C16orf89Q6UX73 402 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 RBM44Q6ZP01 1051 aaKnown RBP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 TRIM46Q7Z4K8 759 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 ARPINQ7Z6K5 226 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 ZNF554Q86TJ5 538 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 SATL1Q86VE3 508 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 ZNF410Q86VK4 478 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 IGDCC3Q8IVU1 814 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 MAP7D3Q8IWC1 876 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 UNC45BQ8IWX7 931 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 CPSF7Q8N684 471 aaKnown RBP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 COLGALT1Q8NBJ5 622 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 GSTCDQ8NEC7 633 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 VN1R2Q8NFZ6 395 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 FBXO27Q8NI29 283 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 GSDMBQ8TAX9 411 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 HM13Q8TCT9 377 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 SLC26A7Q8TE54 656 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 ADAMTS16Q8TE57 1224 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 GAB3Q8WWW8 586 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 CASP10Q92851 521 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 ATOH1Q92858 354 aaPredicted RBP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 DUS3LQ96G46 650 aaKnown RBP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 NAT9Q9BTE0 207 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 SLC2A11Q9BYW1 496 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 IMPG2Q9BZV3 1241 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 FAM49AQ9H0Q0 323 aaPredicted RBP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 CHRDQ9H2X0 955 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 USP29Q9HBJ7 922 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 PLGRKTQ9HBL7 147 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 PCDH18Q9HCL0 1135 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 VPS45Q9NRW7 570 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 TOPORSQ9NS56 1045 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms