RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 YWHAQP27348 245 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 CTBP1Q13363 440 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 THOC5Q13769 683 aaKnown RBP18.14■□□□□ 0.49
GNE-204ENST00000539208 CENPLQ8N0S6 344 aaPredicted RBP18.14■□□□□ 0.49
GNE-204ENST00000539208 TEX26Q8N6G2 289 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 KCNV2Q8TDN2 545 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 ELAC1Q9H777 363 aaKnown RBP18.14■□□□□ 0.49
GNE-204ENST00000539208 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.14■□□□□ 0.49
GNE-204ENST00000539208 COMMD8Q9NX08 183 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 CPSF2Q9P2I0 782 aaKnown RBP18.14■□□□□ 0.49
GNE-204ENST00000539208 SLC2A6Q9UGQ3 507 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 SRRDQ9UH36 339 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 RAP2CQ9Y3L5 183 aa18.14■□□□□ 0.49
GNE-204ENST00000539208 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.14■□□□□ 0.49
GNE-204ENST00000539208 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.13■□□□□ 0.49
GNE-204ENST00000539208 FAM95CA0A1B0GW59 222 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 HEATR9A2RTY3 570 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 DRGXA6NNA5 263 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 PHGDHO43175 533 aaKnown RBP18.13■□□□□ 0.49
GNE-204ENST00000539208 STMN1P16949 149 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 PRDX6P30041 224 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 MPP1Q00013 466 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 TRMT5Q32P41 509 aaKnown RBP18.13■□□□□ 0.49
GNE-204ENST00000539208 FSCBQ5H9T9 825 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 MARC1Q5VT66 337 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 ZNF280DQ6N043 979 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 SLC41A1Q8IVJ1 513 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 ULK2Q8IYT8 1036 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 MAB21L3Q8N8X9 362 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 CMTM5Q96DZ9 223 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 FAM161BQ96MY7 647 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 TTC3P53804 2025 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 PAPSS2O95340 614 aaPredicted RBP18.13■□□□□ 0.49
GNE-204ENST00000539208 SLC1A2P43004 574 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 CD151P48509 253 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 NUMBP49757 651 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 EFEMP1Q12805 493 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 USP4Q13107 963 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 RCN1Q15293 331 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 TSNAXIP1Q2TAA8 658 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 CFAP157Q5JU67 520 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 VWA5B1Q5TIE3 1220 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 TDRD5Q8NAT2 981 aaKnown RBP18.13■□□□□ 0.49
GNE-204ENST00000539208 GABPB2Q8TAK5 448 aaPredicted RBP18.13■□□□□ 0.49
GNE-204ENST00000539208 N4BP2L2Q92802 583 aaPredicted RBP18.13■□□□□ 0.49
GNE-204ENST00000539208 STMN2Q93045 179 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 HMCESQ96FZ2 354 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 GPR78Q96P69 363 aa18.13■□□□□ 0.49
GNE-204ENST00000539208 OXCT2Q9BYC2 517 aaPredicted RBP18.13■□□□□ 0.49
GNE-204ENST00000539208 STX18Q9P2W9 335 aaKnown RBP18.13■□□□□ 0.49
GNE-204ENST00000539208 DOCK4Q8N1I0 1966 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 MYLKQ15746 1914 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 A0A087X1B8 175 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 TK2O00142 265 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 CIB2O75838 187 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 IGLV3-27P01718 113 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 FGFR3P22607 806 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 COPAP53621 1224 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 MXRA7P84157 204 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 POU4F1Q01851 419 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 ALFQ53S48 1182 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 C6orf163Q5TEZ5 329 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 LRRC8EQ6NSJ5 796 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 NEPROQ6NW34 567 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 MFSD6LQ8IWD5 586 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 FSTL5Q8N475 847 aaPredicted RBP18.12■□□□□ 0.49
GNE-204ENST00000539208 ATAD1Q8NBU5 361 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 CALML6Q8TD86 181 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 KCTD4Q8WVF5 259 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 FBXO32Q969P5 355 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 TADA1Q96BN2 335 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 SPATA17Q96L03 361 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 THTPAQ9BU02 230 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 TLR8Q9NR97 1041 aaKnown RBP18.12■□□□□ 0.49
GNE-204ENST00000539208 FBXO5Q9UKT4 447 aa18.12■□□□□ 0.49
GNE-204ENST00000539208 J3KR12 359 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 MATN2O00339 956 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 KRT36O76013 467 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 CNTN5O94779 1100 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 HAPLN1P10915 354 aaPredicted RBP18.11■□□□□ 0.49
GNE-204ENST00000539208 SAT1P21673 171 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 CHRNA4P43681 627 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 GRIA4P48058 902 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 SERPINH1P50454 418 aaKnown RBP18.11■□□□□ 0.49
GNE-204ENST00000539208 SLC34A1Q06495 639 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 ASPHQ12797 758 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 SMARCB1Q12824 385 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 MTA1Q13330 715 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 MSLNQ13421 630 aaPredicted RBP18.11■□□□□ 0.49
GNE-204ENST00000539208 PSMD5Q16401 504 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 FAM171A1Q5VUB5 890 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 FBXL22Q6P050 247 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 TFAP2DQ7Z6R9 452 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 GALNT7Q86SF2 657 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 CEP97Q8IW35 865 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 SCYL1Q96KG9 808 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 ATXN3LQ9H3M9 355 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 NT5MQ9NPB1 228 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 ZNF212Q9UDV6 495 aa18.11■□□□□ 0.49
GNE-204ENST00000539208 VWA8A3KMH1 1905 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms