RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 C15orf62A8K5M9 175 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 YDJCA8MPS7 323 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 BTBD18B2RXH4 712 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 FAM86B1E9PN63 330 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 RRHO14718 337 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 DKC1O60832 514 aaKnown RBP eCLIP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 OR2C1O95371 312 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ALDOAP04075 364 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 EPHA8P29322 1005 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 HOXC13P31276 330 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 STAT6P42226 847 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GLIPR1P48060 266 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 AGTR2P50052 363 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 RAD23AP54725 363 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SLC12A2P55011 1212 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 RPS13P62277 151 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GPC5P78333 572 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TXNL4AP83876 142 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 DPTQ07507 201 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GRIK2Q13002 908 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TUBB3Q13509 450 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 PSMD6Q15008 389 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TRADDQ15628 312 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SPDYAQ5MJ70 313 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ANKRD40Q6AI12 368 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SUMO4Q6EEV6 95 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 DHRS7BQ6IAN0 325 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 MTFR2Q6P444 385 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GLB1LQ6UWU2 654 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ABRAXAS1Q6UWZ7 409 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 PXKQ7Z7A4 578 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 P3H2Q8IVL5 708 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 WDR63Q8IWG1 891 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TIGD4Q8IY51 512 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 IZUMO1Q8IYV9 350 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TCP11L2Q8N4U5 519 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 FAM98AQ8NCA5 519 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 C1orf131Q8NDD1 294 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ABHD11Q8NFV4 315 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TDRD7Q8NHU6 1098 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 RFWD2Q8NHY2 731 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GOLGA1Q92805 767 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SNRNP40Q96DI7 357 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 NEK1Q96PY6 1258 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SPAG5Q96R06 1193 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GPATCH1Q9BRR8 931 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GPR87Q9BY21 358 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TPSD1Q9BZJ3 242 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 CDT1Q9H211 546 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GHITMQ9H3K2 345 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 OSGEPL1Q9H4B0 414 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 CXorf56Q9H5V9 222 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 POLR1BQ9H9Y6 1135 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 PARD6AQ9NPB6 346 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SLC35C2Q9NQQ7 365 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SEPT11Q9NVA2 429 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 MTMR4Q9NYA4 1195 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GDE1Q9NZC3 331 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SLCO3A1Q9UIG8 710 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 RALYQ9UKM9 306 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ARHGAP26Q9UNA1 814 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GPR34Q9UPC5 381 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GDAQ9Y2T3 454 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TCRBV5S1A1TA0A578 114 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TARSL2A2RTX5 802 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 PI4KAP2A4QPH2 592 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 LINC00473A8K010 186 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 F5H697 171 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SPRY1O43609 319 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 FOXD2O60548 495 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 RTN3O95197 1032 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 NDUFA10O95299 355 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 CHRM2P08172 466 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 PRR35P0CG20 571 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 PCNAP12004 261 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 RARGP13631 454 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 AKR1B1P15121 316 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 PORP16435 677 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GNLYP22749 145 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 PRPH2P23942 346 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 YWHAQP27348 245 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ATP5DP30049 168 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 CIITAP33076 1130 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GRIA3P42263 894 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 NUMBP49757 651 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 NLRP5P59047 1200 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 CDK18Q07002 472 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 FOXF2Q12947 444 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 RESTQ13127 1097 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SEMA3BQ13214 749 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SF3B3Q15393 1217 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF362Q5T0B9 420 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SPATA46Q5T0L3 261 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TMEM198Q66K66 360 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 B4GALNT4Q76KP1 1039 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 CNPY4Q8N129 248 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 VPS52Q8N1B4 723 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 FSTL5Q8N475 847 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TEX9Q8N6V9 391 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms