RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 SOX5P35711 763 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 ABL2P42684 1182 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 PTPN9P43378 593 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 DNA2P51530 1060 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 JAM2P57087 298 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 POLR2FP61218 127 aaKnown RBP12.73□□□□□ -0.37
VAMP1-206ENST00000538970 E2F1Q01094 437 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 MAPK8IP2Q13387 824 aaPredicted RBP12.73□□□□□ -0.37
VAMP1-206ENST00000538970 FZD2Q14332 565 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 FAM72AQ5TYM5 149 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 FAM72DQ6L9T8 149 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 RWDD4Q6NW29 188 aaKnown RBP12.73□□□□□ -0.37
VAMP1-206ENST00000538970 STRADAQ7RTN6 431 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 TMC6Q7Z403 805 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 PHLDB2Q86SQ0 1253 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 ZSCAN30Q86W11 494 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 FAM72BQ86X60 149 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 DCP2Q8IU60 420 aaKnown RBP12.73□□□□□ -0.37
VAMP1-206ENST00000538970 PLPP6Q8IY26 295 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 OR6K2Q8NGY2 324 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 SLC30A5Q8TAD4 765 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 SNIP1Q8TAD8 396 aaKnown RBP12.73□□□□□ -0.37
VAMP1-206ENST00000538970 ENOX1Q8TC92 643 aaKnown RBP12.73□□□□□ -0.37
VAMP1-206ENST00000538970 GPT2Q8TD30 523 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 ARHGEF2Q92974 986 aaKnown RBP12.73□□□□□ -0.37
VAMP1-206ENST00000538970 VOPP1Q96AW1 172 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 FEM1CQ96JP0 617 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 BMFQ96LC9 184 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 OSBPL2Q9H1P3 480 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 RETREG1Q9H6L5 497 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 FAM207AQ9NSI2 230 aaPredicted RBP12.73□□□□□ -0.37
VAMP1-206ENST00000538970 TMEM248Q9NWD8 314 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 DNAJC28Q9NX36 388 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 HECAQ9UBI9 543 aaPredicted RBP12.73□□□□□ -0.37
VAMP1-206ENST00000538970 DNAI1Q9UI46 699 aa12.73□□□□□ -0.37
VAMP1-206ENST00000538970 ARID1BQ8NFD5 2236 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-206ENST00000538970 LY6G6EA0A0G2JKS1 128 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 PYCARD-AS1I3L0S3 204 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 SPINT1O43278 529 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 BRINP1O60477 761 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 LRIG2O94898 1065 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 PAK4O96013 591 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-206ENST00000538970 GSRP00390 522 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 MT-CO3P00414 261 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 CSF2P04141 144 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 UNGP13051 313 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-206ENST00000538970 NME1P15531 152 aaKnown RBP12.72□□□□□ -0.37
VAMP1-206ENST00000538970 HDAC4P56524 1084 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 GSCP56915 257 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-206ENST00000538970 GEMIN4P57678 1058 aaKnown RBP12.72□□□□□ -0.37
VAMP1-206ENST00000538970 PTP4A2Q12974 167 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 KRT31Q15323 416 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 ZNF542PQ5EBM4 170 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 CDCP2Q5VXM1 449 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 TRIM72Q6ZMU5 477 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 PARGQ86W56 976 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 CCDC185Q8N715 623 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 ZNF548Q8NEK5 533 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-206ENST00000538970 OR2AP1Q8NGE2 309 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 CENPIQ92674 756 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-206ENST00000538970 RAB7BQ96AH8 199 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 TBC1D31Q96DN5 1066 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 APOLD1Q96LR9 279 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 KLF6Q99612 283 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-206ENST00000538970 C1QTNF2Q9BXJ5 285 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 MAGEB5Q9BZ81 275 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 MAGEH1Q9H213 219 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 VPS16Q9H269 839 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 NLRC4Q9NPP4 1024 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 GGT7Q9UJ14 662 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 ITM2BQ9Y287 266 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 DAAM1Q9Y4D1 1078 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 U3KQA8 63 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 DOCK9Q9BZ29 2069 aa12.72□□□□□ -0.37
VAMP1-206ENST00000538970 URB1O60287 2271 aaKnown RBP12.72□□□□□ -0.37
VAMP1-206ENST00000538970 SPTY2D1-AS1A0A0U1RR47 76 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 NEMP2A6NFY4 417 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 C16orf96A6NNT2 1141 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 J3QKU1 62 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 K7ESM1 405 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 FPGTO14772 594 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 SCAMP1O15126 338 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 RRP8O43159 456 aaKnown RBP12.71□□□□□ -0.37
VAMP1-206ENST00000538970 TSPAN6O43657 245 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 OPA1O60313 960 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 RAMP2O60895 175 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 NEBLO76041 1014 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 GP1BAP07359 652 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 PLEKP08567 350 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-206ENST00000538970 MYF5P13349 255 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 NSFP46459 744 aaKnown RBP12.71□□□□□ -0.37
VAMP1-206ENST00000538970 RABIFP47224 123 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 HNRNPKP61978 463 aaKnown RBP eCLIP12.71□□□□□ -0.37
VAMP1-206ENST00000538970 POLD3Q15054 466 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-206ENST00000538970 ZNF805Q5CZA5 627 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 TPRG1LQ5T0D9 272 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 FKBP15Q5T1M5 1219 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 KDM7AQ6ZMT4 941 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 LEKR1Q6ZMV7 388 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 LRRC69Q6ZNQ3 347 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms