RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	ARSI	Q5FYB1	569 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	KIAA1161	Q6NSJ0	714 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	POLN	Q7Z5Q5	900 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	VSIG1	Q86XK7	387 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CHST14	Q8NCH0	376 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ZNF564	Q8TBZ8	553 aa	Predicted RBP	12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SNX19	Q92543	992 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	HMCES	Q96FZ2	354 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CCDC42	Q96M95	316 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ZNF599	Q96NL3	588 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	GTPBP2	Q9BX10	602 aa	Known RBP	12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	DEF6	Q9H4E7	631 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CWC15	Q9P013	229 aa	Known RBP	12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	HECA	Q9UBI9	543 aa	Predicted RBP	12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PCSK1N	Q9UHG2	260 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ANKRD6	Q9Y2G4	727 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	FCF1	Q9Y324	198 aa	Known RBP	12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	FAM47DP	A6NHR8	397 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ZNF487	B1APH4	448 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	AKR1B15	C9JRZ8	316 aa	Predicted RBP	12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TSPAN6	O43657	245 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	AKR1B10	O60218	316 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	BNIP3L	O60238	219 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PROSC	O94903	275 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	RARA	P10276	462 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CD59	P13987	128 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SERPINB6	P35237	376 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ARHGAP25	P42331	645 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CTSK	P43235	329 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CSNK1E	P49674	416 aa	Known RBP	12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	NOVA1	P51513	510 aa	Known RBP	12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	METAP1	P53582	386 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SHC2	P98077	582 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	BNC1	Q01954	994 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	IL10RB	Q08334	325 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CA9	Q16790	459 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	GLRX5	Q86SX6	157 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	HORMAD1	Q86X24	394 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	DNAAF5	Q86Y56	855 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ARHGAP12	Q8IWW6	846 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	RHOT2	Q8IXI1	618 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TMEM145	Q8NBT3	493 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	RNF214	Q8ND24	703 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SPOCK2	Q92563	424 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TSC1	Q92574	1164 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	VOPP1	Q96AW1	172 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ARRDC3	Q96B67	414 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	MRFAP1L1	Q96HT8	127 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	FEM1C	Q96JP0	617 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TUBGCP5	Q96RT8	1024 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TRIM5	Q9C035	493 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TNKS2	Q9H2K2	1166 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	GAREM1	Q9H706	876 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	EBF2	Q9HAK2	575 aa		12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	UBA2	Q9UBT2	640 aa	Predicted RBP	12.5	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ACACB	O00763	2458 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828		A0A1B0GVT2	93 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	MED19	A0JLT2	244 aa	Predicted RBP	12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	FLRT2	O43155	660 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	KRT7	P08729	469 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ADRB3	P13945	408 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	HSPA9	P38646	679 aa	Known RBP	12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	RXRG	P48443	463 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	DNA2	P51530	1060 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	RENBP	P51606	427 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	C21orf59	P57076	290 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	RHOA	P61586	193 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	RPS21	P63220	83 aa	Known RBP	12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PDK2	Q15119	407 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	KIF19	Q2TAC6	998 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	HLA-B	Q31612	363 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	UAP1L1	Q3KQV9	507 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TMEM259	Q4ZIN3	620 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PPP6R3	Q5H9R7	873 aa	Predicted RBP	12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	RALGPS1	Q5JS13	557 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	FBXL19	Q6PCT2	694 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ADAT2	Q7Z6V5	191 aa	Known RBP	12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	DCP2	Q8IU60	420 aa	Known RBP	12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	MAP7D3	Q8IWC1	876 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	DENND6B	Q8NEG7	585 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	GRIN3A	Q8TCU5	1115 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	FATE1	Q969F0	183 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	IFT43	Q96FT9	208 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SERAC1	Q96JX3	654 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ZNF641	Q96N77	438 aa	Predicted RBP	12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	LENG8	Q96PV6	779 aa	Predicted RBP	12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CSPG4P5	Q96PW8	444 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ANP32E	Q9BTT0	268 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TM6SF2	Q9BZW4	377 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SLC39A8	Q9C0K1	460 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PCDH18	Q9HCL0	1135 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TM7SF3	Q9NS93	570 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	GPATCH2L	Q9NWQ4	482 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CTTNBP2NL	Q9P2B4	639 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	FADS3	Q9Y5Q0	445 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	HS3ST3A1	Q9Y663	406 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	DOCK9	Q9BZ29	2069 aa		12.49	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PLXNA2	O75051	1894 aa		12.48	□□□□□ -0.41
CLTCL1-205	ENST00000538828		A0A1B0GTQ1	180 aa		12.48	□□□□□ -0.41

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