RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 AQP12BA6NM10 295 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 H0YAE9 185 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 GOLGA8MH3BSY2 632 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 ACOX3O15254 700 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 DYNC1LI2O43237 492 aaPredicted RBP6.79□□□□□ -1.32
USP28-207ENST00000538475 AVILO75366 819 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 TOM1L1O75674 476 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 TMEM63AO94886 807 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 KRT75O95678 551 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 B3GALT4O96024 378 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 GSRP00390 522 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 IGLV1-40P01703 118 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 UGT2B4P06133 528 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 NCF2P19878 526 aaPredicted RBP6.79□□□□□ -1.32
USP28-207ENST00000538475 M6PRP20645 277 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 FUT4P22083 530 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 KDELR1P24390 212 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 PIK3R1P27986 724 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 POLD1P28340 1107 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 SERPINB5P36952 375 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 GRIK1P39086 918 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 RXRGP48443 463 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 SERPINB10P48595 397 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 HLCSP50747 726 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 HSD17B4P51659 736 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 THOP1P52888 689 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 MRPS22P82650 360 aaKnown RBP6.79□□□□□ -1.32
USP28-207ENST00000538475 NFATC3Q12968 1075 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 ART3Q13508 389 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 SELPLGQ14242 412 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 PPP2R5DQ14738 602 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 CBX2Q14781 532 aaPredicted RBP6.79□□□□□ -1.32
USP28-207ENST00000538475 KCNJ8Q15842 424 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 AASDHQ4L235 1098 aaPredicted RBP6.79□□□□□ -1.32
USP28-207ENST00000538475 BRDTQ58F21 947 aaPredicted RBP6.79□□□□□ -1.32
USP28-207ENST00000538475 DCAF6Q58WW2 860 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 MDH1BQ5I0G3 518 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 CCNJQ5T5M9 372 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 ATAD3BQ5T9A4 648 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 ANKRD22Q5VYY1 191 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 PRMT9Q6P2P2 845 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 TUBA3EQ6PEY2 450 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 ZBTB49Q6ZSB9 765 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 BEND4Q6ZU67 534 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 C11orf74Q86VG3 221 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 CLEC10AQ8IUN9 316 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 MAPKAPK5Q8IW41 473 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 AQP12AQ8IXF9 295 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 ADGRF2Q8IZF7 708 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 LSMEM2Q8N112 164 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 SLC44A5Q8NCS7 719 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 SMG8Q8ND04 991 aaKnown RBP6.79□□□□□ -1.32
USP28-207ENST00000538475 BHLHE22Q8NFJ8 381 aaPredicted RBP6.79□□□□□ -1.32
USP28-207ENST00000538475 CMASQ8NFW8 434 aaPredicted RBP6.79□□□□□ -1.32
USP28-207ENST00000538475 OR13F1Q8NGS4 319 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 SLC7A14Q8TBB6 771 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 USP33Q8TEY7 942 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 AFG1LQ8WV93 481 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 HSPH1Q92598 858 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 SEPT8Q92599 483 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 SEMA4DQ92854 862 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 KAT5Q92993 513 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 TRIM63Q969Q1 353 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 TMIGD2Q96BF3 282 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 MRRFQ96E11 262 aaKnown RBP6.79□□□□□ -1.32
USP28-207ENST00000538475 TXNDC15Q96J42 360 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 FEM1CQ96JP0 617 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 BTN2A3PQ96KV6 586 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 ZNF778Q96MU6 729 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 SORT1Q99523 831 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 EBNA1BP2Q99848 306 aaKnown RBP6.79□□□□□ -1.32
USP28-207ENST00000538475 LBHD1Q9BQE6 289 aaPredicted RBP6.79□□□□□ -1.32
USP28-207ENST00000538475 NTPCRQ9BSD7 190 aaKnown RBP6.79□□□□□ -1.32
USP28-207ENST00000538475 TEKT3Q9BXF9 490 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 ILKAPQ9H0C8 392 aaPredicted RBP6.79□□□□□ -1.32
USP28-207ENST00000538475 ZNF385DQ9H6B1 395 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 C7orf69Q9H7B7 122 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 COQ10BQ9H8M1 238 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 WDR41Q9HAD4 459 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 CYP4F11Q9HBI6 524 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 POPDC2Q9HBU9 364 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 ACP6Q9NPH0 428 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 TCF7L2Q9NQB0 619 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 RAD18Q9NS91 495 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 MOCS1Q9NZB8 636 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 PKD2L2Q9NZM6 624 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 NPAP1Q9NZP6 1156 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 AGTPBP1Q9UPW5 1226 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 ATP11BQ9Y2G3 1177 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 HIF3AQ9Y2N7 669 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 RAP2CQ9Y3L5 183 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 UGT2A1Q9Y4X1 527 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 PCDHA11Q9Y5I1 949 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 COL4A1P02462 1669 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 STRCQ7RTU9 1775 aa6.79□□□□□ -1.32
USP28-207ENST00000538475 FRMPD2Q68DX3 1309 aaPredicted RBP6.78□□□□□ -1.32
USP28-207ENST00000538475 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.78□□□□□ -1.32
USP28-207ENST00000538475 BCLAF3A2AJT9 711 aaKnown RBP6.78□□□□□ -1.32
USP28-207ENST00000538475 HMX2A2RU54 273 aa6.78□□□□□ -1.32
USP28-207ENST00000538475 C7orf72A4D263 438 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms