RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 ZYG11AQ6WRX3 759 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 OTOP3Q7RTS5 596 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 ZC3HC1Q86WB0 502 aaKnown RBP9.38□□□□□ -0.91
DDB1-211ENST00000538280 TMEM151AQ8N4L1 468 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 ATPAF2Q8N5M1 289 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 RTL3Q8N8U3 475 aaKnown RBP9.38□□□□□ -0.91
DDB1-211ENST00000538280 PCSK9Q8NBP7 692 aaKnown RBP9.38□□□□□ -0.91
DDB1-211ENST00000538280 RBM15BQ8NDT2 890 aaKnown RBP9.38□□□□□ -0.91
DDB1-211ENST00000538280 ACVR1CQ8NER5 493 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 LINC01599Q8WXQ3 324 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 AZIN2Q96A70 460 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 FUBP3Q96I24 572 aaKnown RBP eCLIP9.38□□□□□ -0.91
DDB1-211ENST00000538280 C8orf48Q96LL4 319 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 C1orf74Q96LT6 269 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 RANBP9Q96S59 729 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 ATP13A1Q9HD20 1204 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 ENTPD7Q9NQZ7 604 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 CHRAC1Q9NRG0 131 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 IARS2Q9NSE4 1012 aaKnown RBP9.38□□□□□ -0.91
DDB1-211ENST00000538280 TREX1Q9NSU2 369 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 C20orf96Q9NUD7 363 aaPredicted RBP9.38□□□□□ -0.91
DDB1-211ENST00000538280 PNPOQ9NVS9 261 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.38□□□□□ -0.91
DDB1-211ENST00000538280 ZNF358Q9NW07 568 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 ARMCX1Q9P291 453 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 MARCOQ9UEW3 520 aaPredicted RBP9.38□□□□□ -0.91
DDB1-211ENST00000538280 SCML2Q9UQR0 700 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 TCAF1Q9Y4C2 921 aa9.38□□□□□ -0.91
DDB1-211ENST00000538280 MYO18AQ92614 2054 aaKnown RBP9.38□□□□□ -0.91
DDB1-211ENST00000538280 IGLV3-10A0A075B6K4 115 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.37□□□□□ -0.91
DDB1-211ENST00000538280 B2RBV5 119 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 E9PAM4 449 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 TRIM13O60858 407 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 CABYRO75952 493 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 DDHD2O94830 711 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 PSMG1O95456 288 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 PEX11BO96011 259 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 FGBP02675 491 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 ENO1P06733 434 aaKnown RBP9.37□□□□□ -0.91
DDB1-211ENST00000538280 SBK3P0C264 359 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 KITP10721 976 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 ARNTP27540 789 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 GABRB3P28472 473 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 PGM1P36871 562 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 MAGEA11P43364 429 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 MLLT6P55198 1093 aaPredicted RBP9.37□□□□□ -0.91
DDB1-211ENST00000538280 IRF9Q00978 393 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 YWHAHQ04917 246 aaPredicted RBP9.37□□□□□ -0.91
DDB1-211ENST00000538280 BTKQ06187 659 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 ITGA7Q13683 1181 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 ITGA9Q13797 1035 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 KPNB1Q14974 876 aaKnown RBP9.37□□□□□ -0.91
DDB1-211ENST00000538280 UGP2Q16851 508 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 KIAA0930Q6ICG6 404 aaPredicted RBP9.37□□□□□ -0.91
DDB1-211ENST00000538280 KDELC1Q6UW63 502 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 EPGNQ6UW88 154 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 RANBP10Q6VN20 620 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 NET1Q7Z628 596 aaPredicted RBP9.37□□□□□ -0.91
DDB1-211ENST00000538280 C14orf80Q86SX3 495 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 RTN4RL1Q86UN2 441 aaPredicted RBP9.37□□□□□ -0.91
DDB1-211ENST00000538280 COLGALT2Q8IYK4 626 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 DCP1BQ8IZD4 617 aaKnown RBP9.37□□□□□ -0.91
DDB1-211ENST00000538280 UMODL1-AS1Q8N2C9 162 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 SPATA22Q8NHS9 363 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 GIMAP7Q8NHV1 300 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 FBXO27Q8NI29 283 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 USP33Q8TEY7 942 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 PPP4R1Q8TF05 950 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 HASPINQ8TF76 798 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 STYXQ8WUJ0 223 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 RNF34Q969K3 372 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 MCUR1Q96AQ8 359 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 TADA1Q96BN2 335 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 RSRC1Q96IZ7 334 aaKnown RBP9.37□□□□□ -0.91
DDB1-211ENST00000538280 FCRL2Q96LA5 508 aaPredicted RBP9.37□□□□□ -0.91
DDB1-211ENST00000538280 MRGPRX2Q96LB1 330 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 SERPINB11Q96P15 392 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 APOL2Q9BQE5 337 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 FICDQ9BVA6 458 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 CDH19Q9H159 772 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 EPHX3Q9H6B9 360 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 NOL6Q9H6R4 1146 aaKnown RBP9.37□□□□□ -0.91
DDB1-211ENST00000538280 CAB39LQ9H9S4 337 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 SLC28A3Q9HAS3 691 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 ARNT2Q9HBZ2 717 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 TRMT13Q9NUP7 481 aaKnown RBP9.37□□□□□ -0.91
DDB1-211ENST00000538280 TBC1D13Q9NVG8 400 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 SFMBT1Q9UHJ3 866 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 MSRAQ9UJ68 235 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 APOBEC2Q9Y235 224 aaKnown RBP9.37□□□□□ -0.91
DDB1-211ENST00000538280 INPP5FQ9Y2H2 1132 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 HS3ST4Q9Y661 456 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 CDY1Q9Y6F8 540 aa9.37□□□□□ -0.91
DDB1-211ENST00000538280 DOCK4Q8N1I0 1966 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 A0A1W2PQH9 124 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 ZBBXA8MT70 800 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 F8W810 466 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 DFFAO00273 331 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 LIN7AO14910 233 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms