RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 DNA2P51530 1060 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 CCR5P51681 352 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 NDST2P52849 883 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 DPYSL3Q14195 570 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 TCEAL1Q15170 157 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 SHBQ15464 509 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 ZNF284Q2VY69 593 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 MYLK3Q32MK0 819 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 PARP15Q460N3 678 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 TTC31Q49AM3 519 aaPredicted RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 INO80DQ53TQ3 878 aaPredicted RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 PRAMEF14Q5SWL7 426 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 SYCP2LQ5T4T6 812 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 SEL1L3Q68CR1 1132 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 KDM7AQ6ZMT4 941 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 PARS2Q7L3T8 475 aaKnown RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 DGLUCYQ7Z3D6 616 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 VPS36Q86VN1 386 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 ZSWIM9Q86XI8 627 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 PGBD5Q8N414 524 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 MINDY1Q8N5J2 469 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 PQLC3Q8N755 202 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 TSEN2Q8NCE0 465 aaKnown RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 PCDH19Q8TAB3 1148 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 LRRN4Q8WUT4 740 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 TEKT4Q8WW24 435 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 RAPGEF5Q92565 580 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 KLK6Q92876 244 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 FUBP1Q96AE4 644 aaKnown RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 MRFAP1L1Q96HT8 127 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 EXOC2Q96KP1 924 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 CAMK1GQ96NX5 476 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 HEPHQ9BQS7 1158 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 NUSAP1Q9BXS6 441 aaKnown RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 HDAC8Q9BY41 377 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 CATSPERBQ9H7T0 1116 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 TMEM9BQ9NQ34 198 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.54□□□□□ -1.04
SPARC-208ENST00000538026 KLHL11Q9NVR0 708 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 DNAAF2Q9NVR5 837 aaKnown RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 UVRAGQ9P2Y5 699 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 IL36AQ9UHA7 158 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 GGT7Q9UJ14 662 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 NCKAP1Q9Y2A7 1128 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 FNDC3AQ9Y2H6 1198 aaKnown RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 FADS3Q9Y5Q0 445 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 SNX11Q9Y5W9 270 aa8.54□□□□□ -1.04
SPARC-208ENST00000538026 ANKRD11Q6UB99 2663 aaPredicted RBP8.54□□□□□ -1.04
SPARC-208ENST00000538026 TBC1D3DA0A087WVF3 549 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 TBC1D3IA0A087WXS9 549 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 TBC1D3EA0A087X179 549 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 TBC1D3KA0A087X1G2 549 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 A0A0U1RQJ8 604 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 TBC1D3FA6NER0 549 aaPredicted RBP8.53□□□□□ -1.04
SPARC-208ENST00000538026 EIF3CLB5ME19 914 aaKnown RBP8.53□□□□□ -1.04
SPARC-208ENST00000538026 TBC1D3LB9A6J9 549 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 AREL1O15033 823 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 RAD51BO15315 384 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 SLC7A4O43246 635 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 AKR1B10O60218 316 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 MAFKO60675 156 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 KCNK5O95279 499 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 GSRP00390 522 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 TBC1D3HP0C7X1 549 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 TIMP2P16035 220 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 ITGB7P26010 798 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 MAT2AP31153 395 aaKnown RBP8.53□□□□□ -1.04
SPARC-208ENST00000538026 ETFBP38117 255 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 CTSKP43235 329 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 SLC10A7Q0GE19 358 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 SLC10A2Q12908 348 aaPredicted RBP8.53□□□□□ -1.04
SPARC-208ENST00000538026 HLA-BQ31612 363 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 UAP1L1Q3KQV9 507 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 TMEM259Q4ZIN3 620 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 FAM46CQ5VWP2 391 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 TBC1D3GQ6DHY5 549 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 TBC1D3CQ6IPX1 549 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 RAD9BQ6WBX8 426 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 DBX2Q6ZNG2 339 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 ERN2Q76MJ5 926 aaKnown RBP8.53□□□□□ -1.04
SPARC-208ENST00000538026 SPATS2Q86XZ4 545 aaKnown RBP8.53□□□□□ -1.04
SPARC-208ENST00000538026 TMEM139Q8IV31 216 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 CNGA4Q8IV77 575 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 TBC1D3Q8IZP1 549 aaPredicted RBP8.53□□□□□ -1.04
SPARC-208ENST00000538026 OR2AP1Q8NGE2 309 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 SNX19Q92543 992 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 FAF2Q96CS3 445 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 CCDC42Q96M95 316 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 EIF3CQ99613 913 aaKnown RBP8.53□□□□□ -1.04
SPARC-208ENST00000538026 GTPBP2Q9BX10 602 aaKnown RBP8.53□□□□□ -1.04
SPARC-208ENST00000538026 KDM4CQ9H3R0 1056 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 GOLPH3Q9H4A6 298 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 CTTNBP2NLQ9P2B4 639 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 WASF3Q9UPY6 502 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 ITM2BQ9Y287 266 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 ANKRD6Q9Y2G4 727 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 HYOU1Q9Y4L1 999 aa8.53□□□□□ -1.04
SPARC-208ENST00000538026 KMT2BQ9UMN6 2715 aaPredicted RBP8.52□□□□□ -1.04
SPARC-208ENST00000538026 PLXNB3Q9ULL4 1909 aa8.52□□□□□ -1.04
SPARC-208ENST00000538026 A0A1W2PQU0 124 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms