RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 CCR10P46092 362 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 PFN3P60673 137 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 PITX1P78337 314 aaPredicted RBP11.36□□□□□ -0.59
CLPB-208ENST00000538021 AUHQ13825 339 aaKnown RBP11.36□□□□□ -0.59
CLPB-208ENST00000538021 STILQ15468 1287 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 RESP18Q5W5W9 173 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 DPY19L3Q6ZPD9 716 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 BEND5Q7L4P6 421 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 UBR7Q8N806 425 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 Q8N9G6 341 aaPredicted RBP11.36□□□□□ -0.59
CLPB-208ENST00000538021 PCDH19Q8TAB3 1148 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 CCDC47Q96A33 483 aaKnown RBP11.36□□□□□ -0.59
CLPB-208ENST00000538021 LENG8Q96PV6 779 aaPredicted RBP11.36□□□□□ -0.59
CLPB-208ENST00000538021 CMKLR1Q99788 373 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 C2orf49Q9BVC5 232 aaPredicted RBP11.36□□□□□ -0.59
CLPB-208ENST00000538021 POPDC2Q9HBU9 364 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 VPS51Q9UID3 782 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 PCDHA7Q9UN72 937 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 SCN8AQ9UQD0 1980 aa11.36□□□□□ -0.59
CLPB-208ENST00000538021 RNF225M0QZC1 329 aaPredicted RBP11.35□□□□□ -0.59
CLPB-208ENST00000538021 CLDN11O75508 207 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 IGLV3-25P01717 112 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 SLC2A3P11169 496 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 ITGB7P26010 798 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 L1CAMP32004 1257 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 CCR1P32246 355 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 DNA2P51530 1060 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 PPARDQ03181 441 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 ELOCQ15369 112 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 TMEM164Q5U3C3 297 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 FOXD4L5Q5VV16 416 aaPredicted RBP11.35□□□□□ -0.59
CLPB-208ENST00000538021 C22orf39Q6P5X5 142 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 CCNJLQ8IV13 435 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 FOXD4L4Q8WXT5 416 aaPredicted RBP11.35□□□□□ -0.59
CLPB-208ENST00000538021 TMEM159Q96B96 161 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 TBATAQ96M53 351 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 PSMB7Q99436 277 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 C1QTNF2Q9BXJ5 285 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 SLC12A9Q9BXP2 914 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 UPF2Q9HAU5 1272 aaKnown RBP11.35□□□□□ -0.59
CLPB-208ENST00000538021 PLEKHB1Q9UF11 243 aaPredicted RBP11.35□□□□□ -0.59
CLPB-208ENST00000538021 TBC1D30Q9Y2I9 924 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 WASF2Q9Y6W5 498 aa11.35□□□□□ -0.59
CLPB-208ENST00000538021 SPTBN1Q01082 2364 aaKnown RBP11.34□□□□□ -0.59
CLPB-208ENST00000538021 ICE1Q9Y2F5 2266 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 STMND1H3BQB6 276 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 CETN3O15182 167 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 AP1G1O43747 822 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 CNTN5O94779 1100 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 ADCY5O95622 1261 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 CTSEP14091 401 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 CD82P27701 267 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 EIF4A3P38919 411 aaKnown RBP11.34□□□□□ -0.59
CLPB-208ENST00000538021 ACADSBP45954 432 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 ATP1A2P50993 1020 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 CLCN6P51797 869 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 CDH4P55283 916 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 YWHAZP63104 245 aaKnown RBP11.34□□□□□ -0.59
CLPB-208ENST00000538021 CDK17Q00537 523 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 PHF19Q5T6S3 580 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 PARS2Q7L3T8 475 aaKnown RBP11.34□□□□□ -0.59
CLPB-208ENST00000538021 RD3Q7Z3Z2 195 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 VPS36Q86VN1 386 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 ZSCAN30Q86W11 494 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 ATCAYQ86WG3 371 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 HID1Q8IV36 788 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 FSTL5Q8N475 847 aaPredicted RBP11.34□□□□□ -0.59
CLPB-208ENST00000538021 IL22RA1Q8N6P7 574 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 DENND6BQ8NEG7 585 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 SIK2Q9H0K1 926 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 DDIT4Q9NX09 232 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 GGT7Q9UJ14 662 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 TUBD1Q9UJT1 453 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 GPR34Q9UPC5 381 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 ITM2BQ9Y287 266 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 COQ4Q9Y3A0 265 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 HS3ST4Q9Y661 456 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 RNF215Q9Y6U7 377 aa11.34□□□□□ -0.59
CLPB-208ENST00000538021 UNC13CQ8NB66 2214 aa11.33□□□□□ -0.59
CLPB-208ENST00000538021 A0A0D9SEW6 157 aa11.33□□□□□ -0.6
CLPB-208ENST00000538021 E5RJQ4 531 aa11.33□□□□□ -0.6
CLPB-208ENST00000538021 TSPAN6O43657 245 aa11.33□□□□□ -0.6
CLPB-208ENST00000538021 ALPIP09923 528 aa11.33□□□□□ -0.6
CLPB-208ENST00000538021 IGFALSP35858 605 aa11.33□□□□□ -0.6
CLPB-208ENST00000538021 GPD2P43304 727 aa11.33□□□□□ -0.6
CLPB-208ENST00000538021 BLKP51451 505 aa11.33□□□□□ -0.6
CLPB-208ENST00000538021 MCCD1P59942 119 aaPredicted RBP11.33□□□□□ -0.6
CLPB-208ENST00000538021 YPEL5P62699 121 aa11.33□□□□□ -0.6
CLPB-208ENST00000538021 ZFP36L1Q07352 338 aaKnown RBP11.33□□□□□ -0.6
CLPB-208ENST00000538021 EIF4EBP2Q13542 120 aaPredicted RBP11.33□□□□□ -0.6
CLPB-208ENST00000538021 TAF5Q15542 800 aa11.33□□□□□ -0.6
CLPB-208ENST00000538021 ALFQ53S48 1182 aa11.33□□□□□ -0.6
CLPB-208ENST00000538021 LVRNQ6Q4G3 990 aa11.33□□□□□ -0.6
CLPB-208ENST00000538021 MACC1Q6ZN28 852 aa11.33□□□□□ -0.6
CLPB-208ENST00000538021 GKN2Q86XP6 184 aa11.33□□□□□ -0.6
CLPB-208ENST00000538021 GUF1Q8N442 669 aaKnown RBP11.33□□□□□ -0.6
CLPB-208ENST00000538021 RYBPQ8N488 228 aaPredicted RBP11.33□□□□□ -0.6
CLPB-208ENST00000538021 OR6C4Q8NGE1 309 aa11.33□□□□□ -0.6
CLPB-208ENST00000538021 C9orf43Q8TAL5 461 aaPredicted RBP11.33□□□□□ -0.6
CLPB-208ENST00000538021 MED15Q96RN5 788 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms